RNA–Protein interactions for RNA: ENST00000511754.5

TNPO1-208, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-208ENST00000511754 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
TNPO1-208ENST00000511754 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
TNPO1-208ENST00000511754 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
TNPO1-208ENST00000511754 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
TNPO1-208ENST00000511754 FOXD1Q16676 465 aa20.41■□□□□ 0.86
TNPO1-208ENST00000511754 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
TNPO1-208ENST00000511754 MSH5O43196 834 aa19.39■□□□□ 0.69
TNPO1-208ENST00000511754 PIAS4Q8N2W9 510 aaPredicted RBP18.94■□□□□ 0.62
TNPO1-208ENST00000511754 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
TNPO1-208ENST00000511754 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
TNPO1-208ENST00000511754 ADRA2BP18089 450 aa18.49■□□□□ 0.55
TNPO1-208ENST00000511754 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
TNPO1-208ENST00000511754 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
TNPO1-208ENST00000511754 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
TNPO1-208ENST00000511754 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
TNPO1-208ENST00000511754 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
TNPO1-208ENST00000511754 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
TNPO1-208ENST00000511754 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.2
TNPO1-208ENST00000511754 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
TNPO1-208ENST00000511754 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
TNPO1-208ENST00000511754 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
TNPO1-208ENST00000511754 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
TNPO1-208ENST00000511754 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
TNPO1-208ENST00000511754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.082e-11■■□□□ 12.8
TNPO1-208ENST00000511754 POTEHQ6S545 545 aa15.55■□□□□ 0.08
TNPO1-208ENST00000511754 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
TNPO1-208ENST00000511754 DSG3P32926 999 aa15.2■□□□□ 0.02
TNPO1-208ENST00000511754 CAPN15O75808 1086 aa15.15■□□□□ 0.02
TNPO1-208ENST00000511754 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
TNPO1-208ENST00000511754 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
TNPO1-208ENST00000511754 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
TNPO1-208ENST00000511754 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.05
TNPO1-208ENST00000511754 ABCB7O75027 752 aa14.74□□□□□ -0.05
TNPO1-208ENST00000511754 APLP2Q06481 763 aa14.71□□□□□ -0.05
TNPO1-208ENST00000511754 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
TNPO1-208ENST00000511754 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
TNPO1-208ENST00000511754 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
TNPO1-208ENST00000511754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
TNPO1-208ENST00000511754 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
TNPO1-208ENST00000511754 CHRDL2Q6WN34 429 aa14.46□□□□□ -0.09
TNPO1-208ENST00000511754 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
TNPO1-208ENST00000511754 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
TNPO1-208ENST00000511754 KCNA4P22459 653 aa14.25□□□□□ -0.13
TNPO1-208ENST00000511754 POLA2Q14181 598 aa14.21□□□□□ -0.13
TNPO1-208ENST00000511754 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
TNPO1-208ENST00000511754 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.17
TNPO1-208ENST00000511754 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
TNPO1-208ENST00000511754 HAX1O00165 279 aa13.93□□□□□ -0.18
TNPO1-208ENST00000511754 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
TNPO1-208ENST00000511754 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
TNPO1-208ENST00000511754 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.24e-7■■■□□ 15.7
TNPO1-208ENST00000511754 PITPNM1O00562 1244 aa13.77□□□□□ -0.21
TNPO1-208ENST00000511754 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
TNPO1-208ENST00000511754 ATF5Q9Y2D1 282 aaPredicted RBP13.72□□□□□ -0.21
TNPO1-208ENST00000511754 EVX2Q03828 476 aa13.66□□□□□ -0.22
TNPO1-208ENST00000511754 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
TNPO1-208ENST00000511754 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
TNPO1-208ENST00000511754 PRKAR2AP13861 404 aaKnown RBP13.44□□□□□ -0.26
TNPO1-208ENST00000511754 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
TNPO1-208ENST00000511754 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
TNPO1-208ENST00000511754 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
TNPO1-208ENST00000511754 LHX8Q68G74 356 aa13.39□□□□□ -0.27
TNPO1-208ENST00000511754 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
TNPO1-208ENST00000511754 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
TNPO1-208ENST00000511754 GABBR2O75899 941 aa13.34□□□□□ -0.27
TNPO1-208ENST00000511754 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
TNPO1-208ENST00000511754 FBLN2P98095 1184 aa13.27□□□□□ -0.29
TNPO1-208ENST00000511754 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
TNPO1-208ENST00000511754 CHADLQ6NUI6 762 aa13.14□□□□□ -0.31
TNPO1-208ENST00000511754 ZNF692Q9BU19 519 aaPredicted RBP13.14□□□□□ -0.31
TNPO1-208ENST00000511754 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
TNPO1-208ENST00000511754 PLSCR2Q9NRY7 297 aa13.08□□□□□ -0.32
TNPO1-208ENST00000511754 ZBTB22O15209 634 aa13.07□□□□□ -0.32
TNPO1-208ENST00000511754 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
TNPO1-208ENST00000511754 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
TNPO1-208ENST00000511754 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
TNPO1-208ENST00000511754 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
TNPO1-208ENST00000511754 CLCN6P51797 869 aa12.95□□□□□ -0.34
TNPO1-208ENST00000511754 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
TNPO1-208ENST00000511754 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
TNPO1-208ENST00000511754 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
TNPO1-208ENST00000511754 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
TNPO1-208ENST00000511754 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
TNPO1-208ENST00000511754 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
TNPO1-208ENST00000511754 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
TNPO1-208ENST00000511754 OTUD5Q96G74 571 aa12.68□□□□□ -0.38
TNPO1-208ENST00000511754 POTEMA6NI47 508 aa12.64□□□□□ -0.39
TNPO1-208ENST00000511754 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
TNPO1-208ENST00000511754 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
TNPO1-208ENST00000511754 POTEGQ6S5H5 508 aa12.58□□□□□ -0.4
TNPO1-208ENST00000511754 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
TNPO1-208ENST00000511754 PCDH10Q9P2E7 1040 aa12.49□□□□□ -0.41
TNPO1-208ENST00000511754 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
TNPO1-208ENST00000511754 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
TNPO1-208ENST00000511754 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
TNPO1-208ENST00000511754 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
TNPO1-208ENST00000511754 METRNQ9UJH8 293 aa12.35□□□□□ -0.43
TNPO1-208ENST00000511754 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
TNPO1-208ENST00000511754 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
TNPO1-208ENST00000511754 C7P10643 843 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms