RNA–Protein interactions for RNA: ENST00000523903.5

NT5C3B-216, Transcript of 5'-nucleotidase, cytosolic IIIB, humanhuman

TSL 1 (best)

Gene NT5C3B, Length 1,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3B-216ENST00000523903 NISCHQ9Y2I1 1504 aa53.51■■■■■ 6.16
NT5C3B-216ENST00000523903 CCDC180Q9P1Z9 1646 aa47.42■■■■■ 5.18
NT5C3B-216ENST00000523903 ABCC9O60706 1549 aa46.29■■■■■ 5
NT5C3B-216ENST00000523903 DCAF8L2P0C7V8 631 aa44.76■■■■■ 4.76
NT5C3B-216ENST00000523903 ZCCHC6Q5VYS8 1495 aaKnown RBP44.61■■■■■ 4.73
NT5C3B-216ENST00000523903 RB1CC1Q8TDY2 1594 aa44.53■■■■■ 4.72
NT5C3B-216ENST00000523903 NACADO15069 1562 aa44.52■■■■■ 4.72
NT5C3B-216ENST00000523903 MYO15BQ96JP2 1530 aa44.26■■■■■ 4.68
NT5C3B-216ENST00000523903 DCAF1Q9Y4B6 1507 aa44.2■■■■■ 4.67
NT5C3B-216ENST00000523903 UNC13AQ9UPW8 1703 aa43.66■■■■■ 4.58
NT5C3B-216ENST00000523903 SCRIBQ14160 1630 aa43.41■■■■■ 4.54
NT5C3B-216ENST00000523903 PABPN1Q86U42 306 aaKnown RBP eCLIP43.34■■■■■ 4.537e-9■■□□□ 12.7
NT5C3B-216ENST00000523903 BICRAQ9NZM4 1560 aa43.24■■■■■ 4.51
NT5C3B-216ENST00000523903 SHROOM4Q9ULL8 1493 aa42.62■■■■■ 4.41
NT5C3B-216ENST00000523903 DNAJC5BQ9UF47 199 aa42.32■■■■■ 4.37
NT5C3B-216ENST00000523903 EIF4G1Q04637 1599 aaKnown RBP42.06■■■■■ 4.32
NT5C3B-216ENST00000523903 CC2D2AQ9P2K1 1620 aa41.86■■■■■ 4.29
NT5C3B-216ENST00000523903 CECR2Q9BXF3 1484 aa41.74■■■■■ 4.27
NT5C3B-216ENST00000523903 SMARCA4P51532 1647 aa41.49■■■■■ 4.23
NT5C3B-216ENST00000523903 BAZ1AQ9NRL2 1556 aaPredicted RBP41.43■■■■■ 4.22
NT5C3B-216ENST00000523903 MROH2BQ7Z745 1585 aa41.3■■■■■ 4.2
NT5C3B-216ENST00000523903 ATAD2BQ9ULI0 1458 aa41.19■■■■■ 4.18
NT5C3B-216ENST00000523903 SMARCA2P51531 1590 aa41.11■■■■■ 4.17
NT5C3B-216ENST00000523903 NCAPD3P42695 1498 aa41.09■■■■■ 4.17
NT5C3B-216ENST00000523903 PEG3Q9GZU2 1588 aa41.01■■■■■ 4.16
NT5C3B-216ENST00000523903 WIZO95785 1651 aa40.9■■■■■ 4.14
NT5C3B-216ENST00000523903 HMGXB3Q12766 1538 aa40.89■■■■■ 4.14
NT5C3B-216ENST00000523903 RSF1Q96T23 1441 aaPredicted RBP40.89■■■■■ 4.14
NT5C3B-216ENST00000523903 BAZ1BQ9UIG0 1483 aaKnown RBP40.86■■■■■ 4.13
NT5C3B-216ENST00000523903 TOP2AP11388 1531 aaKnown RBP40.39■■■■■ 4.06
NT5C3B-216ENST00000523903 SUPT5HO00267 1087 aaKnown RBP40.16■■■■■ 4.02
NT5C3B-216ENST00000523903 NESP48681 1621 aa40.15■■■■■ 4.02
NT5C3B-216ENST00000523903 LAMC3Q9Y6N6 1575 aa39.97■■■■□ 3.99
NT5C3B-216ENST00000523903 CCDC88BA6NC98 1476 aa39.96■■■■□ 3.99
NT5C3B-216ENST00000523903 CADPSQ9ULU8 1353 aa39.93■■■■□ 3.98
NT5C3B-216ENST00000523903 ERCC6Q03468 1493 aa39.84■■■■□ 3.97
NT5C3B-216ENST00000523903 CFTRP13569 1480 aa39.73■■■■□ 3.95
NT5C3B-216ENST00000523903 PDS5BQ9NTI5 1447 aa39.69■■■■□ 3.94
NT5C3B-216ENST00000523903 KIF21AQ7Z4S6 1674 aa39.68■■■■□ 3.94
NT5C3B-216ENST00000523903 PRDM2Q13029 1718 aa39.5■■■■□ 3.91
NT5C3B-216ENST00000523903 FANCD2Q9BXW9 1451 aa39.5■■■■□ 3.91
NT5C3B-216ENST00000523903 THOC2Q8NI27 1593 aaKnown RBP39.42■■■■□ 3.9
NT5C3B-216ENST00000523903 CEP164Q9UPV0 1460 aa39.4■■■■□ 3.9
NT5C3B-216ENST00000523903 MRC2Q9UBG0 1479 aa39.29■■■■□ 3.88
NT5C3B-216ENST00000523903 CUX2O14529 1486 aa39.24■■■■□ 3.87
NT5C3B-216ENST00000523903 WDR62O43379 1518 aa39.14■■■■□ 3.86
NT5C3B-216ENST00000523903 URB2Q14146 1524 aaKnown RBP39.11■■■■□ 3.85
NT5C3B-216ENST00000523903 TOPBP1Q92547 1522 aa38.9■■■■□ 3.82
NT5C3B-216ENST00000523903 DNMBPQ6XZF7 1577 aa38.85■■■■□ 3.81
NT5C3B-216ENST00000523903 ABCC8Q09428 1581 aa38.82■■■■□ 3.81
NT5C3B-216ENST00000523903 CUX1P39880 1505 aa38.72■■■■□ 3.79
NT5C3B-216ENST00000523903 POLA1P09884 1462 aaPredicted RBP38.59■■■■□ 3.77
NT5C3B-216ENST00000523903 FGD5Q6ZNL6 1462 aa38.54■■■■□ 3.76
NT5C3B-216ENST00000523903 IFT140Q96RY7 1462 aa38.54■■■■□ 3.76
NT5C3B-216ENST00000523903 WRNQ14191 1432 aaPredicted RBP eCLIP38.53■■■■□ 3.76
NT5C3B-216ENST00000523903 SYNJ1O43426 1573 aa38.47■■■■□ 3.75
NT5C3B-216ENST00000523903 RAD54L2Q9Y4B4 1467 aa38.47■■■■□ 3.75
NT5C3B-216ENST00000523903 TARBP1Q13395 1621 aaKnown RBP38.46■■■■□ 3.75
NT5C3B-216ENST00000523903 ZNF608Q9ULD9 1512 aaPredicted RBP38.45■■■■□ 3.74
NT5C3B-216ENST00000523903 SOGA1O94964 1423 aa38.44■■■■□ 3.74
NT5C3B-216ENST00000523903 TOP2BQ02880 1626 aa38.41■■■■□ 3.74
NT5C3B-216ENST00000523903 BIVM-ERCC5R4GMW8 1640 aa38.41■■■■□ 3.74
NT5C3B-216ENST00000523903 EIF4G3O43432 1585 aaKnown RBP38.27■■■■□ 3.72
NT5C3B-216ENST00000523903 AQRO60306 1485 aaKnown RBP eCLIP38.26■■■■□ 3.721e-9■■■■□ 23
NT5C3B-216ENST00000523903 TDRD9Q8NDG6 1382 aaKnown RBP38.23■■■■□ 3.71
NT5C3B-216ENST00000523903 WDR97A6NE52 1622 aa38.2■■■■□ 3.71
NT5C3B-216ENST00000523903 ABCA10Q8WWZ4 1543 aa38.13■■■■□ 3.69
NT5C3B-216ENST00000523903 GAPVD1Q14C86 1478 aa37.99■■■■□ 3.67
NT5C3B-216ENST00000523903 ABCA5Q8WWZ7 1642 aa37.98■■■■□ 3.67
NT5C3B-216ENST00000523903 PBRM1Q86U86 1689 aa37.93■■■■□ 3.66
NT5C3B-216ENST00000523903 GRIN2BQ13224 1484 aa37.92■■■■□ 3.66
NT5C3B-216ENST00000523903 SNAPC4Q5SXM2 1469 aa37.88■■■■□ 3.66
NT5C3B-216ENST00000523903 TRIM41Q8WV44 630 aa37.84■■■■□ 3.65
NT5C3B-216ENST00000523903 DNAJC5Q9H3Z4 198 aa37.83■■■■□ 3.65
NT5C3B-216ENST00000523903 FBLN2P98095 1184 aa37.79■■■■□ 3.64
NT5C3B-216ENST00000523903 CHD1O14646 1710 aa37.79■■■■□ 3.64
NT5C3B-216ENST00000523903 MAGI1Q96QZ7 1491 aaPredicted RBP37.78■■■■□ 3.64
NT5C3B-216ENST00000523903 OSCARQ8IYS5 282 aa37.74■■■■□ 3.63
NT5C3B-216ENST00000523903 KIF27Q86VH2 1401 aa37.68■■■■□ 3.62
NT5C3B-216ENST00000523903 ERICH3Q5RHP9 1530 aa37.67■■■■□ 3.62
NT5C3B-216ENST00000523903 CHMP7Q8WUX9 453 aaPredicted RBP37.66■■■■□ 3.62
NT5C3B-216ENST00000523903 SYNJ2O15056 1496 aa37.65■■■■□ 3.62
NT5C3B-216ENST00000523903 ADAMTS12P58397 1594 aa37.6■■■■□ 3.61
NT5C3B-216ENST00000523903 CHIC1Q5VXU3 224 aa37.56■■■■□ 3.6
NT5C3B-216ENST00000523903 RUSC2Q8N2Y8 1516 aa37.54■■■■□ 3.6
NT5C3B-216ENST00000523903 IGF1RP08069 1367 aa37.54■■■■□ 3.6
NT5C3B-216ENST00000523903 FHAD1B1AJZ9 1412 aa37.53■■■■□ 3.6
NT5C3B-216ENST00000523903 GRIN2AQ12879 1464 aa37.45■■■■□ 3.59
NT5C3B-216ENST00000523903 CUL7Q14999 1698 aa37.39■■■■□ 3.58
NT5C3B-216ENST00000523903 CARMIL1Q5VZK9 1371 aa37.32■■■■□ 3.57
NT5C3B-216ENST00000523903 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
NT5C3B-216ENST00000523903 CEP170Q5SW79 1584 aa37.29■■■■□ 3.56
NT5C3B-216ENST00000523903 NUP160Q12769 1436 aa37.25■■■■□ 3.55
NT5C3B-216ENST00000523903 FAM9AQ8IZU1 332 aaPredicted RBP37.15■■■■□ 3.54
NT5C3B-216ENST00000523903 RIMBP3CA6NJZ7 1639 aa37.14■■■■□ 3.54
NT5C3B-216ENST00000523903 RIMBP3BA6NNM3 1639 aa37.14■■■■□ 3.54
NT5C3B-216ENST00000523903 RIMBP3Q9UFD9 1639 aa37.14■■■■□ 3.54
NT5C3B-216ENST00000523903 ARHGEF11O15085 1522 aa37.13■■■■□ 3.53
NT5C3B-216ENST00000523903 RAPGEF2Q9Y4G8 1499 aa37.1■■■■□ 3.53
NT5C3B-216ENST00000523903 CSRNP3Q8WYN3 585 aa37.09■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms