RNA–Protein interactions for RNA: ENST00000506528.5

TNPO1-205, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-205ENST00000506528 AEBP2Q6ZN18 517 aaPredicted RBP27.75■■■□□ 2.03
TNPO1-205ENST00000506528 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
TNPO1-205ENST00000506528 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
TNPO1-205ENST00000506528 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
TNPO1-205ENST00000506528 FOXD1Q16676 465 aa22.17■■□□□ 1.14
TNPO1-205ENST00000506528 POTEDQ86YR6 584 aa21.34■■□□□ 1.01
TNPO1-205ENST00000506528 MSH5O43196 834 aa20.87■□□□□ 0.93
TNPO1-205ENST00000506528 PIAS4Q8N2W9 510 aaPredicted RBP20.54■□□□□ 0.88
TNPO1-205ENST00000506528 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
TNPO1-205ENST00000506528 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
TNPO1-205ENST00000506528 ADRA2BP18089 450 aa20.23■□□□□ 0.83
TNPO1-205ENST00000506528 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
TNPO1-205ENST00000506528 DMRT2Q9Y5R5 561 aa18.7■□□□□ 0.58
TNPO1-205ENST00000506528 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
TNPO1-205ENST00000506528 CACNB1Q02641 598 aaPredicted RBP18.23■□□□□ 0.51
TNPO1-205ENST00000506528 DCAF8L1A6NGE4 600 aa17.89■□□□□ 0.45
TNPO1-205ENST00000506528 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
TNPO1-205ENST00000506528 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
TNPO1-205ENST00000506528 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
TNPO1-205ENST00000506528 CNKSR2Q8WXI2 1034 aa17.53■□□□□ 0.4
TNPO1-205ENST00000506528 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
TNPO1-205ENST00000506528 C1QBPQ07021 282 aaKnown RBP17.48■□□□□ 0.39
TNPO1-205ENST00000506528 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
TNPO1-205ENST00000506528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.32e-11■■□□□ 12.8
TNPO1-205ENST00000506528 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
TNPO1-205ENST00000506528 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
TNPO1-205ENST00000506528 POTEHQ6S545 545 aa16.59■□□□□ 0.25
TNPO1-205ENST00000506528 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
TNPO1-205ENST00000506528 DSG3P32926 999 aa16.51■□□□□ 0.23
TNPO1-205ENST00000506528 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
TNPO1-205ENST00000506528 CAPN15O75808 1086 aa16.42■□□□□ 0.22
TNPO1-205ENST00000506528 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
TNPO1-205ENST00000506528 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
TNPO1-205ENST00000506528 ABCB7O75027 752 aa16.03■□□□□ 0.16
TNPO1-205ENST00000506528 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
TNPO1-205ENST00000506528 KCNA4P22459 653 aa15.92■□□□□ 0.14
TNPO1-205ENST00000506528 APLP2Q06481 763 aa15.91■□□□□ 0.14
TNPO1-205ENST00000506528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
TNPO1-205ENST00000506528 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
TNPO1-205ENST00000506528 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
TNPO1-205ENST00000506528 RBM42Q9BTD8 480 aaKnown RBP15.68■□□□□ 0.1
TNPO1-205ENST00000506528 CHRDL2Q6WN34 429 aa15.6■□□□□ 0.09
TNPO1-205ENST00000506528 POLA2Q14181 598 aa15.51■□□□□ 0.07
TNPO1-205ENST00000506528 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
TNPO1-205ENST00000506528 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
TNPO1-205ENST00000506528 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
TNPO1-205ENST00000506528 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
TNPO1-205ENST00000506528 PIP4P2Q8N4L2 257 aa15.14■□□□□ 0.01
TNPO1-205ENST00000506528 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
TNPO1-205ENST00000506528 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0
TNPO1-205ENST00000506528 OSCARQ8IYS5 282 aa15.05■□□□□ -0
TNPO1-205ENST00000506528 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
TNPO1-205ENST00000506528 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
TNPO1-205ENST00000506528 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.014e-7■■■□□ 15.7
TNPO1-205ENST00000506528 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
TNPO1-205ENST00000506528 HAX1O00165 279 aa14.96□□□□□ -0.01
TNPO1-205ENST00000506528 EVX2Q03828 476 aa14.84□□□□□ -0.03
TNPO1-205ENST00000506528 ZBTB22O15209 634 aa14.68□□□□□ -0.06
TNPO1-205ENST00000506528 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
TNPO1-205ENST00000506528 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
TNPO1-205ENST00000506528 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
TNPO1-205ENST00000506528 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
TNPO1-205ENST00000506528 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
TNPO1-205ENST00000506528 ATXN8OSP0DMR3 200 aa14.55□□□□□ -0.08
TNPO1-205ENST00000506528 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
TNPO1-205ENST00000506528 CLEC11AQ9Y240 323 aa14.49□□□□□ -0.09
TNPO1-205ENST00000506528 FBLN2P98095 1184 aa14.48□□□□□ -0.09
TNPO1-205ENST00000506528 MKRN4PQ13434 485 aaPredicted RBP14.46□□□□□ -0.09
TNPO1-205ENST00000506528 SPDYE1Q8NFV5 336 aaPredicted RBP14.46□□□□□ -0.09
TNPO1-205ENST00000506528 GABBR2O75899 941 aa14.42□□□□□ -0.1
TNPO1-205ENST00000506528 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
TNPO1-205ENST00000506528 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
TNPO1-205ENST00000506528 LHX8Q68G74 356 aa14.33□□□□□ -0.12
TNPO1-205ENST00000506528 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
TNPO1-205ENST00000506528 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
TNPO1-205ENST00000506528 PRR29P0C7W0 189 aa14.17□□□□□ -0.14
TNPO1-205ENST00000506528 POTEIP0CG38 1075 aa14.16□□□□□ -0.14
TNPO1-205ENST00000506528 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
TNPO1-205ENST00000506528 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
TNPO1-205ENST00000506528 FARP1Q9Y4F1 1045 aaPredicted RBP14.03□□□□□ -0.16
TNPO1-205ENST00000506528 CLCN6P51797 869 aa13.92□□□□□ -0.18
TNPO1-205ENST00000506528 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
TNPO1-205ENST00000506528 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
TNPO1-205ENST00000506528 PLSCR2Q9NRY7 297 aa13.82□□□□□ -0.2
TNPO1-205ENST00000506528 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
TNPO1-205ENST00000506528 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
TNPO1-205ENST00000506528 GALR2O43603 387 aaPredicted RBP13.73□□□□□ -0.21
TNPO1-205ENST00000506528 OTUD5Q96G74 571 aa13.71□□□□□ -0.21
TNPO1-205ENST00000506528 POTEB2H3BUK9 544 aa13.69□□□□□ -0.22
TNPO1-205ENST00000506528 STAG3Q9UJ98 1225 aa13.59□□□□□ -0.23
TNPO1-205ENST00000506528 PHF12Q96QT6 1004 aa13.58□□□□□ -0.24
TNPO1-205ENST00000506528 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
TNPO1-205ENST00000506528 POTEMA6NI47 508 aa13.53□□□□□ -0.24
TNPO1-205ENST00000506528 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
TNPO1-205ENST00000506528 PAK3O75914 559 aaPredicted RBP13.48□□□□□ -0.25
TNPO1-205ENST00000506528 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
TNPO1-205ENST00000506528 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
TNPO1-205ENST00000506528 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
TNPO1-205ENST00000506528 ASTLQ6HA08 431 aaPredicted RBP13.41□□□□□ -0.26
TNPO1-205ENST00000506528 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms