RNA–Protein interactions for RNA: ENST00000536996.5

SPPL3-204, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-204ENST00000536996 NISCHQ9Y2I1 1504 aa34.79■■■■□ 3.16
SPPL3-204ENST00000536996 CCDC180Q9P1Z9 1646 aa30.98■■■□□ 2.55
SPPL3-204ENST00000536996 ABCC9O60706 1549 aa29.81■■■□□ 2.36
SPPL3-204ENST00000536996 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
SPPL3-204ENST00000536996 NACADO15069 1562 aa28.96■■■□□ 2.23
SPPL3-204ENST00000536996 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
SPPL3-204ENST00000536996 MYO15BQ96JP2 1530 aa28.9■■■□□ 2.22
SPPL3-204ENST00000536996 DCAF1Q9Y4B6 1507 aa28.87■■■□□ 2.21
SPPL3-204ENST00000536996 DCAF8L2P0C7V8 631 aa28.73■■■□□ 2.19
SPPL3-204ENST00000536996 UNC13AQ9UPW8 1703 aa28.44■■■□□ 2.14
SPPL3-204ENST00000536996 SCRIBQ14160 1630 aa28.14■■■□□ 2.09
SPPL3-204ENST00000536996 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
SPPL3-204ENST00000536996 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
SPPL3-204ENST00000536996 PABPN1Q86U42 306 aaKnown RBP eCLIP27.79■■■□□ 2.04
SPPL3-204ENST00000536996 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.95
SPPL3-204ENST00000536996 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
SPPL3-204ENST00000536996 DNAJC5BQ9UF47 199 aa27.03■■□□□ 1.92
SPPL3-204ENST00000536996 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
SPPL3-204ENST00000536996 SMARCA4P51532 1647 aa26.99■■□□□ 1.91
SPPL3-204ENST00000536996 BAZ1AQ9NRL2 1556 aaPredicted RBP26.98■■□□□ 1.91
SPPL3-204ENST00000536996 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
SPPL3-204ENST00000536996 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
SPPL3-204ENST00000536996 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
SPPL3-204ENST00000536996 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
SPPL3-204ENST00000536996 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
SPPL3-204ENST00000536996 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
SPPL3-204ENST00000536996 WIZO95785 1651 aa26.58■■□□□ 1.85
SPPL3-204ENST00000536996 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
SPPL3-204ENST00000536996 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
SPPL3-204ENST00000536996 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
SPPL3-204ENST00000536996 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
SPPL3-204ENST00000536996 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
SPPL3-204ENST00000536996 CCDC88BA6NC98 1476 aa25.91■■□□□ 1.74
SPPL3-204ENST00000536996 PRDM2Q13029 1718 aa25.9■■□□□ 1.74
SPPL3-204ENST00000536996 NESP48681 1621 aa25.88■■□□□ 1.73
SPPL3-204ENST00000536996 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
SPPL3-204ENST00000536996 CFTRP13569 1480 aa25.79■■□□□ 1.72
SPPL3-204ENST00000536996 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
SPPL3-204ENST00000536996 PDS5BQ9NTI5 1447 aa25.7■■□□□ 1.7
SPPL3-204ENST00000536996 ERCC6Q03468 1493 aa25.69■■□□□ 1.7
SPPL3-204ENST00000536996 FANCD2Q9BXW9 1451 aa25.57■■□□□ 1.68
SPPL3-204ENST00000536996 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
SPPL3-204ENST00000536996 CEP164Q9UPV0 1460 aa25.54■■□□□ 1.68
SPPL3-204ENST00000536996 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
SPPL3-204ENST00000536996 WDR62O43379 1518 aa25.4■■□□□ 1.66
SPPL3-204ENST00000536996 CUX2O14529 1486 aa25.39■■□□□ 1.65
SPPL3-204ENST00000536996 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
SPPL3-204ENST00000536996 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
SPPL3-204ENST00000536996 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
SPPL3-204ENST00000536996 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
SPPL3-204ENST00000536996 CUX1P39880 1505 aa25.12■■□□□ 1.61
SPPL3-204ENST00000536996 BIVM-ERCC5R4GMW8 1640 aa25.1■■□□□ 1.61
SPPL3-204ENST00000536996 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
SPPL3-204ENST00000536996 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
SPPL3-204ENST00000536996 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
SPPL3-204ENST00000536996 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
SPPL3-204ENST00000536996 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
SPPL3-204ENST00000536996 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
SPPL3-204ENST00000536996 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
SPPL3-204ENST00000536996 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
SPPL3-204ENST00000536996 SOGA1O94964 1423 aa24.86■■□□□ 1.57
SPPL3-204ENST00000536996 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
SPPL3-204ENST00000536996 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
SPPL3-204ENST00000536996 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
SPPL3-204ENST00000536996 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
SPPL3-204ENST00000536996 ABCA5Q8WWZ7 1642 aa24.74■■□□□ 1.55
SPPL3-204ENST00000536996 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
SPPL3-204ENST00000536996 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.54
SPPL3-204ENST00000536996 TDRD9Q8NDG6 1382 aaKnown RBP24.65■■□□□ 1.54
SPPL3-204ENST00000536996 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
SPPL3-204ENST00000536996 GRIN2BQ13224 1484 aa24.59■■□□□ 1.53
SPPL3-204ENST00000536996 CHD1O14646 1710 aa24.55■■□□□ 1.52
SPPL3-204ENST00000536996 MAGI1Q96QZ7 1491 aaPredicted RBP24.53■■□□□ 1.52
SPPL3-204ENST00000536996 ERICH3Q5RHP9 1530 aa24.52■■□□□ 1.52
SPPL3-204ENST00000536996 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
SPPL3-204ENST00000536996 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
SPPL3-204ENST00000536996 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
SPPL3-204ENST00000536996 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
SPPL3-204ENST00000536996 CUL7Q14999 1698 aa24.43■■□□□ 1.5
SPPL3-204ENST00000536996 SYNJ2O15056 1496 aa24.41■■□□□ 1.5
SPPL3-204ENST00000536996 CHIC1Q5VXU3 224 aa24.4■■□□□ 1.5
SPPL3-204ENST00000536996 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
SPPL3-204ENST00000536996 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
SPPL3-204ENST00000536996 IGF1RP08069 1367 aa24.3■■□□□ 1.48
SPPL3-204ENST00000536996 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
SPPL3-204ENST00000536996 OSCARQ8IYS5 282 aa24.28■■□□□ 1.48
SPPL3-204ENST00000536996 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
SPPL3-204ENST00000536996 FBLN2P98095 1184 aa24.25■■□□□ 1.47
SPPL3-204ENST00000536996 EEA1Q15075 1411 aa24.24■■□□□ 1.47
SPPL3-204ENST00000536996 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.46
SPPL3-204ENST00000536996 DNAJC5Q9H3Z4 198 aa24.19■■□□□ 1.46
SPPL3-204ENST00000536996 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
SPPL3-204ENST00000536996 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
SPPL3-204ENST00000536996 NUP160Q12769 1436 aa24.16■■□□□ 1.46
SPPL3-204ENST00000536996 RAPGEF2Q9Y4G8 1499 aa24.11■■□□□ 1.45
SPPL3-204ENST00000536996 PRXQ9BXM0 1461 aa24.09■■□□□ 1.45
SPPL3-204ENST00000536996 CTTNBP2Q8WZ74 1663 aa24.08■■□□□ 1.44
SPPL3-204ENST00000536996 CSRNP3Q8WYN3 585 aa24.06■■□□□ 1.44
SPPL3-204ENST00000536996 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
SPPL3-204ENST00000536996 KIF21BO75037 1637 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 312 ms