RNA–Protein interactions for RNA: ENST00000451997.5

SH3BP1-203, Transcript of SH3 domain binding protein 1, humanhuman

TSL 2

Gene SH3BP1, Length 3,123 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP1-203ENST00000451997 NISCHQ9Y2I1 1504 aa24.24■■□□□ 1.47
SH3BP1-203ENST00000451997 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
SH3BP1-203ENST00000451997 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
SH3BP1-203ENST00000451997 HRCP23327 699 aa21.25■□□□□ 0.99
SH3BP1-203ENST00000451997 PCGF6Q9BYE7 350 aa21.2■□□□□ 0.98
SH3BP1-203ENST00000451997 PPARGC1BQ86YN6 1023 aaKnown RBP21.19■□□□□ 0.98
SH3BP1-203ENST00000451997 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
SH3BP1-203ENST00000451997 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
SH3BP1-203ENST00000451997 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
SH3BP1-203ENST00000451997 LOC105371045A0A1W2PR82 267 aa20.78■□□□□ 0.92
SH3BP1-203ENST00000451997 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
SH3BP1-203ENST00000451997 ZCCHC6Q5VYS8 1495 aaKnown RBP20.52■□□□□ 0.87
SH3BP1-203ENST00000451997 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
SH3BP1-203ENST00000451997 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
SH3BP1-203ENST00000451997 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
SH3BP1-203ENST00000451997 FAM9AQ8IZU1 332 aaPredicted RBP20.18■□□□□ 0.82
SH3BP1-203ENST00000451997 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
SH3BP1-203ENST00000451997 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
SH3BP1-203ENST00000451997 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
SH3BP1-203ENST00000451997 ABCC9O60706 1549 aa19.81■□□□□ 0.76
SH3BP1-203ENST00000451997 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
SH3BP1-203ENST00000451997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
SH3BP1-203ENST00000451997 TTBK1Q5TCY1 1321 aaPredicted RBP19.7■□□□□ 0.74
SH3BP1-203ENST00000451997 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
SH3BP1-203ENST00000451997 CCER1Q8TC90 406 aaPredicted RBP19.6■□□□□ 0.73
SH3BP1-203ENST00000451997 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
SH3BP1-203ENST00000451997 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
SH3BP1-203ENST00000451997 GTF3C3Q9Y5Q9 886 aa19.54■□□□□ 0.72
SH3BP1-203ENST00000451997 RB1CC1Q8TDY2 1594 aa19.45■□□□□ 0.7
SH3BP1-203ENST00000451997 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
SH3BP1-203ENST00000451997 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
SH3BP1-203ENST00000451997 YTHDC1Q96MU7 727 aaKnown RBP19.36■□□□□ 0.69
SH3BP1-203ENST00000451997 CENPBP07199 599 aaPredicted RBP19.28■□□□□ 0.68
SH3BP1-203ENST00000451997 CECR2Q9BXF3 1484 aa19.21■□□□□ 0.67
SH3BP1-203ENST00000451997 NACADO15069 1562 aa19.19■□□□□ 0.66
SH3BP1-203ENST00000451997 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
SH3BP1-203ENST00000451997 MIER1Q8N108 512 aa19.06■□□□□ 0.64
SH3BP1-203ENST00000451997 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
SH3BP1-203ENST00000451997 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
SH3BP1-203ENST00000451997 UBTFP17480 764 aaKnown RBP19■□□□□ 0.63
SH3BP1-203ENST00000451997 WIZO95785 1651 aa18.98■□□□□ 0.63
SH3BP1-203ENST00000451997 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
SH3BP1-203ENST00000451997 RANGAP1P46060 587 aaPredicted RBP18.91■□□□□ 0.62
SH3BP1-203ENST00000451997 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
SH3BP1-203ENST00000451997 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
SH3BP1-203ENST00000451997 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
SH3BP1-203ENST00000451997 SOGA1O94964 1423 aa18.89■□□□□ 0.61
SH3BP1-203ENST00000451997 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
SH3BP1-203ENST00000451997 MYT1Q01538 1121 aa18.81■□□□□ 0.6
SH3BP1-203ENST00000451997 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
SH3BP1-203ENST00000451997 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.591e-323■■■■■ 56.5
SH3BP1-203ENST00000451997 TNIKQ9UKE5 1360 aa18.7■□□□□ 0.58
SH3BP1-203ENST00000451997 UNC13AQ9UPW8 1703 aa18.64■□□□□ 0.57
SH3BP1-203ENST00000451997 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
SH3BP1-203ENST00000451997 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
SH3BP1-203ENST00000451997 SUPT16HQ9Y5B9 1047 aaKnown RBP18.57■□□□□ 0.56
SH3BP1-203ENST00000451997 APLP2Q06481 763 aa18.55■□□□□ 0.56
SH3BP1-203ENST00000451997 KCNH8Q96L42 1107 aa18.5■□□□□ 0.55
SH3BP1-203ENST00000451997 BCANQ96GW7 911 aa18.49■□□□□ 0.55
SH3BP1-203ENST00000451997 GOLGA3Q08378 1498 aa18.47■□□□□ 0.55
SH3BP1-203ENST00000451997 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
SH3BP1-203ENST00000451997 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
SH3BP1-203ENST00000451997 CLIP1P30622 1438 aa18.44■□□□□ 0.54
SH3BP1-203ENST00000451997 ITGAEP38570 1179 aa18.44■□□□□ 0.54
SH3BP1-203ENST00000451997 TSHZ2Q9NRE2 1034 aa18.43■□□□□ 0.54
SH3BP1-203ENST00000451997 TOP2AP11388 1531 aaKnown RBP18.42■□□□□ 0.54
SH3BP1-203ENST00000451997 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
SH3BP1-203ENST00000451997 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
SH3BP1-203ENST00000451997 EEA1Q15075 1411 aa18.35■□□□□ 0.53
SH3BP1-203ENST00000451997 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
SH3BP1-203ENST00000451997 VPS8Q8N3P4 1428 aa18.3■□□□□ 0.52
SH3BP1-203ENST00000451997 RAPGEF2Q9Y4G8 1499 aa18.3■□□□□ 0.52
SH3BP1-203ENST00000451997 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
SH3BP1-203ENST00000451997 ANP32EQ9BTT0 268 aa18.25■□□□□ 0.51
SH3BP1-203ENST00000451997 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
SH3BP1-203ENST00000451997 FKBP8Q14318 412 aa18.24■□□□□ 0.51
SH3BP1-203ENST00000451997 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
SH3BP1-203ENST00000451997 DDX10Q13206 875 aaKnown RBP18.2■□□□□ 0.5
SH3BP1-203ENST00000451997 KIF21BO75037 1637 aa18.17■□□□□ 0.5
SH3BP1-203ENST00000451997 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
SH3BP1-203ENST00000451997 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
SH3BP1-203ENST00000451997 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
SH3BP1-203ENST00000451997 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
SH3BP1-203ENST00000451997 CLSPNQ9HAW4 1339 aa18.08■□□□□ 0.49
SH3BP1-203ENST00000451997 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
SH3BP1-203ENST00000451997 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
SH3BP1-203ENST00000451997 RBM19Q9Y4C8 960 aaKnown RBP18.03■□□□□ 0.48
SH3BP1-203ENST00000451997 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
SH3BP1-203ENST00000451997 ARAP1Q96P48 1450 aa18■□□□□ 0.47
SH3BP1-203ENST00000451997 IRX6P78412 446 aaPredicted RBP17.98■□□□□ 0.47
SH3BP1-203ENST00000451997 ATP1B4Q9UN42 357 aaPredicted RBP17.98■□□□□ 0.47
SH3BP1-203ENST00000451997 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
SH3BP1-203ENST00000451997 FAM50AQ14320 339 aaKnown RBP17.96■□□□□ 0.47
SH3BP1-203ENST00000451997 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
SH3BP1-203ENST00000451997 NEFLP07196 543 aa17.94■□□□□ 0.46
SH3BP1-203ENST00000451997 P3H3Q8IVL6 736 aa17.92■□□□□ 0.46
SH3BP1-203ENST00000451997 MSH5O43196 834 aa17.9■□□□□ 0.46
SH3BP1-203ENST00000451997 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
SH3BP1-203ENST00000451997 PPP1R15AO75807 674 aaPredicted RBP17.88■□□□□ 0.45
SH3BP1-203ENST00000451997 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms