Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01554Q52M75 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01554Q52M75 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01554Q52M75 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01554Q52M75 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01554Q52M75 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01554Q52M75 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC11.54□□□□□ -0.56
LINC01554Q52M75 ERN1-208ENST00000606895 2068 ntBASIC11.54□□□□□ -0.56
LINC01554Q52M75 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01554Q52M75 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01554Q52M75 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01554Q52M75 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC01554Q52M75 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC01554Q52M75 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC01554Q52M75 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC11.53□□□□□ -0.56
LINC01554Q52M75 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01554Q52M75 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
LINC01554Q52M75 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC01554Q52M75 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC01554Q52M75 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC01554Q52M75 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01554Q52M75 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01554Q52M75 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
LINC01554Q52M75 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC11.52□□□□□ -0.56
LINC01554Q52M75 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
LINC01554Q52M75 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01554Q52M75 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
LINC01554Q52M75 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
LINC01554Q52M75 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
LINC01554Q52M75 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
LINC01554Q52M75 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 SETD8P1-201ENST00000623146 1180 ntBASIC11.52□□□□□ -0.57
LINC01554Q52M75 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01554Q52M75 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01554Q52M75 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01554Q52M75 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01554Q52M75 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01554Q52M75 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01554Q52M75 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01554Q52M75 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01554Q52M75 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01554Q52M75 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01554Q52M75 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01554Q52M75 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC01554Q52M75 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LINC01554Q52M75 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01554Q52M75 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC01554Q52M75 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01554Q52M75 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01554Q52M75 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01554Q52M75 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01554Q52M75 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC01554Q52M75 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01554Q52M75 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01554Q52M75 LINC00565-201ENST00000562710 2331 ntBASIC11.51□□□□□ -0.57
LINC01554Q52M75 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LINC01554Q52M75 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms