RNA–Protein interactions for RNA: ENST00000397412.7

CRAMP1-202, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-202ENST00000397412 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
CRAMP1-202ENST00000397412 EHMT2Q96KQ7 1210 aa26.65■■□□□ 1.86
CRAMP1-202ENST00000397412 PELP1Q8IZL8 1130 aaKnown RBP26.42■■□□□ 1.82
CRAMP1-202ENST00000397412 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
CRAMP1-202ENST00000397412 FAM9AQ8IZU1 332 aaPredicted RBP25.84■■□□□ 1.73
CRAMP1-202ENST00000397412 APLP2Q06481 763 aa25.81■■□□□ 1.72
CRAMP1-202ENST00000397412 ERICH6Q7L0X2 663 aa25.8■■□□□ 1.72
CRAMP1-202ENST00000397412 TTBK1Q5TCY1 1321 aaPredicted RBP25.67■■□□□ 1.7
CRAMP1-202ENST00000397412 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
CRAMP1-202ENST00000397412 ATP1B4Q9UN42 357 aaPredicted RBP25.4■■□□□ 1.66
CRAMP1-202ENST00000397412 RANGAP1P46060 587 aaPredicted RBP25.39■■□□□ 1.66
CRAMP1-202ENST00000397412 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
CRAMP1-202ENST00000397412 MYT1Q01538 1121 aa25.09■■□□□ 1.61
CRAMP1-202ENST00000397412 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
CRAMP1-202ENST00000397412 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
CRAMP1-202ENST00000397412 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
CRAMP1-202ENST00000397412 NEFLP07196 543 aa24.7■■□□□ 1.54
CRAMP1-202ENST00000397412 DAXXQ9UER7 740 aaPredicted RBP24.64■■□□□ 1.53
CRAMP1-202ENST00000397412 CENPBP07199 599 aaPredicted RBP24.62■■□□□ 1.53
CRAMP1-202ENST00000397412 YTHDC1Q96MU7 727 aaKnown RBP24.57■■□□□ 1.52
CRAMP1-202ENST00000397412 POLR3GLQ9BT43 218 aa24.56■■□□□ 1.52
CRAMP1-202ENST00000397412 SLC4A1APQ9BWU0 796 aaKnown RBP24.49■■□□□ 1.51
CRAMP1-202ENST00000397412 CNGB1Q14028 1251 aaPredicted RBP24.44■■□□□ 1.5
CRAMP1-202ENST00000397412 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
CRAMP1-202ENST00000397412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
CRAMP1-202ENST00000397412 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
CRAMP1-202ENST00000397412 ITGAEP38570 1179 aa24■■□□□ 1.43
CRAMP1-202ENST00000397412 PPARGC1BQ86YN6 1023 aaKnown RBP24■■□□□ 1.43
CRAMP1-202ENST00000397412 CLSPNQ9HAW4 1339 aa24■■□□□ 1.43
CRAMP1-202ENST00000397412 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
CRAMP1-202ENST00000397412 SLC24A1O60721 1099 aa23.96■■□□□ 1.43
CRAMP1-202ENST00000397412 ZNF316A6NFI3 1004 aaPredicted RBP23.95■■□□□ 1.42
CRAMP1-202ENST00000397412 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
CRAMP1-202ENST00000397412 BCL11AQ9H165 835 aa23.87■■□□□ 1.41
CRAMP1-202ENST00000397412 ZBTB47Q9UFB7 747 aaPredicted RBP23.57■■□□□ 1.36
CRAMP1-202ENST00000397412 RTL5Q5HYW3 569 aaPredicted RBP23.56■■□□□ 1.36
CRAMP1-202ENST00000397412 BCANQ96GW7 911 aa23.54■■□□□ 1.36
CRAMP1-202ENST00000397412 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
CRAMP1-202ENST00000397412 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
CRAMP1-202ENST00000397412 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
CRAMP1-202ENST00000397412 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
CRAMP1-202ENST00000397412 ZNF326Q5BKZ1 582 aaKnown RBP23.13■■□□□ 1.29
CRAMP1-202ENST00000397412 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
CRAMP1-202ENST00000397412 NEFMP07197 916 aa23.06■■□□□ 1.28
CRAMP1-202ENST00000397412 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
CRAMP1-202ENST00000397412 A0A0G2JS52 829 aa22.96■■□□□ 1.27
CRAMP1-202ENST00000397412 FBLN2P98095 1184 aa22.95■■□□□ 1.26
CRAMP1-202ENST00000397412 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
CRAMP1-202ENST00000397412 TRIM26Q12899 539 aaPredicted RBP22.83■■□□□ 1.24
CRAMP1-202ENST00000397412 ESF1Q9H501 851 aaKnown RBP22.81■■□□□ 1.24
CRAMP1-202ENST00000397412 CDK11BP21127 795 aaKnown RBP22.75■■□□□ 1.23
CRAMP1-202ENST00000397412 CDK11AQ9UQ88 783 aaPredicted RBP22.75■■□□□ 1.23
CRAMP1-202ENST00000397412 HSP90AA1P07900 732 aaKnown RBP22.74■■□□□ 1.23
CRAMP1-202ENST00000397412 HRCP23327 699 aa22.72■■□□□ 1.23
CRAMP1-202ENST00000397412 TULP1O00294 542 aaPredicted RBP22.71■■□□□ 1.23
CRAMP1-202ENST00000397412 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
CRAMP1-202ENST00000397412 ANP32BQ92688 251 aaKnown RBP22.69■■□□□ 1.22
CRAMP1-202ENST00000397412 NPM2Q86SE8 214 aaKnown RBP22.68■■□□□ 1.22
CRAMP1-202ENST00000397412 PLEKHG5O94827 1062 aa22.68■■□□□ 1.22
CRAMP1-202ENST00000397412 ARID3CA6NKF2 412 aa22.61■■□□□ 1.21
CRAMP1-202ENST00000397412 ANP32CO43423 234 aa22.59■■□□□ 1.21
CRAMP1-202ENST00000397412 EIF5BO60841 1220 aaKnown RBP22.59■■□□□ 1.21
CRAMP1-202ENST00000397412 CHGAP10645 457 aaKnown RBP22.57■■□□□ 1.2
CRAMP1-202ENST00000397412 DIEXFQ68CQ4 756 aaKnown RBP22.56■■□□□ 1.2
CRAMP1-202ENST00000397412 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.2
CRAMP1-202ENST00000397412 LOC105371045A0A1W2PR82 267 aa22.51■■□□□ 1.19
CRAMP1-202ENST00000397412 ZBTB7CA1YPR0 619 aa22.49■■□□□ 1.19
CRAMP1-202ENST00000397412 ARXQ96QS3 562 aa22.48■■□□□ 1.19
CRAMP1-202ENST00000397412 ANP32AP39687 249 aaKnown RBP22.44■■□□□ 1.18
CRAMP1-202ENST00000397412 ZNF777Q9ULD5 760 aaPredicted RBP22.42■■□□□ 1.18
CRAMP1-202ENST00000397412 SENP3Q9H4L4 574 aaPredicted RBP22.36■■□□□ 1.17
CRAMP1-202ENST00000397412 UPF2Q9HAU5 1272 aaKnown RBP22.31■■□□□ 1.16
CRAMP1-202ENST00000397412 SALL2Q9Y467 1007 aaPredicted RBP22.3■■□□□ 1.16
CRAMP1-202ENST00000397412 C14orf37Q86TY3 774 aa22.29■■□□□ 1.16
CRAMP1-202ENST00000397412 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
CRAMP1-202ENST00000397412 HAP1P54257 671 aaPredicted RBP22.2■■□□□ 1.14
CRAMP1-202ENST00000397412 TAOK2Q9UL54 1235 aa22.16■■□□□ 1.14
CRAMP1-202ENST00000397412 NPHP1O15259 732 aa22.15■■□□□ 1.14
CRAMP1-202ENST00000397412 TPRNQ4KMQ1 711 aa22.13■■□□□ 1.13
CRAMP1-202ENST00000397412 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
CRAMP1-202ENST00000397412 GTF3C3Q9Y5Q9 886 aa22.11■■□□□ 1.13
CRAMP1-202ENST00000397412 NPM1P06748 294 aaKnown RBP eCLIP22.1■■□□□ 1.13
CRAMP1-202ENST00000397412 GLIPR1L2Q4G1C9 344 aa22.06■■□□□ 1.12
CRAMP1-202ENST00000397412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.123e-6■■□□□ 12
CRAMP1-202ENST00000397412 NBR1Q14596 966 aa22.02■■□□□ 1.11
CRAMP1-202ENST00000397412 CLSTN1O94985 981 aa22■■□□□ 1.11
CRAMP1-202ENST00000397412 MYH16Q9H6N6 1097 aa21.99■■□□□ 1.11
CRAMP1-202ENST00000397412 FAM9BQ8IZU0 186 aa21.94■■□□□ 1.1
CRAMP1-202ENST00000397412 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.91■■□□□ 1.1
CRAMP1-202ENST00000397412 ZRSR1Q15695 479 aaKnown RBP21.91■■□□□ 1.1
CRAMP1-202ENST00000397412 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
CRAMP1-202ENST00000397412 NCLP19338 710 aaKnown RBP21.86■■□□□ 1.09
CRAMP1-202ENST00000397412 PRM3Q9NNZ6 103 aa21.84■■□□□ 1.09
CRAMP1-202ENST00000397412 KDM2AQ9Y2K7 1162 aa21.8■■□□□ 1.08
CRAMP1-202ENST00000397412 FKBP8Q14318 412 aa21.8■■□□□ 1.08
CRAMP1-202ENST00000397412 ARID4BQ4LE39 1312 aaPredicted RBP21.8■■□□□ 1.08
CRAMP1-202ENST00000397412 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
CRAMP1-202ENST00000397412 LMOD2Q6P5Q4 547 aa21.79■■□□□ 1.08
CRAMP1-202ENST00000397412 TMC1Q8TDI8 760 aa21.77■■□□□ 1.08
CRAMP1-202ENST00000397412 HNRNPUQ00839 825 aaKnown RBP eCLIP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms