Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 AL590560.3-201ENST00000623350 461 ntBASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA7Q9UN72 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 SAMD11P1-201ENST00000571429 661 ntBASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 AC007787.1-201ENST00000588095 1583 ntBASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 AC100757.3-201ENST00000622361 1406 ntBASIC17.47■□□□□ 0.39
PCDHA7Q9UN72 INTS4P1-203ENST00000641008 3683 ntBASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 LILRP1-201ENST00000444199 1370 ntBASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 KRT18P13-201ENST00000400056 1290 ntBASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 TREML5P-201ENST00000421694 576 ntBASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 AC092337.1-201ENST00000568699 1129 ntBASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms