RNA–Protein interactions for RNA: ENST00000506113.5

ABLIM3-206, Transcript of actin binding LIM protein family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABLIM3, Length 4,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-206ENST00000506113 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
ABLIM3-206ENST00000506113 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
ABLIM3-206ENST00000506113 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
ABLIM3-206ENST00000506113 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
ABLIM3-206ENST00000506113 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
ABLIM3-206ENST00000506113 FAM9AQ8IZU1 332 aaPredicted RBP24.86■■□□□ 1.57
ABLIM3-206ENST00000506113 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
ABLIM3-206ENST00000506113 APLP2Q06481 763 aa24.47■■□□□ 1.51
ABLIM3-206ENST00000506113 ABCC9O60706 1549 aa24.32■■□□□ 1.48
ABLIM3-206ENST00000506113 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
ABLIM3-206ENST00000506113 PCGF6Q9BYE7 350 aa24.27■■□□□ 1.48
ABLIM3-206ENST00000506113 RANGAP1P46060 587 aaPredicted RBP24.22■■□□□ 1.47
ABLIM3-206ENST00000506113 UBTFP17480 764 aaKnown RBP24.11■■□□□ 1.45
ABLIM3-206ENST00000506113 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
ABLIM3-206ENST00000506113 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.42
ABLIM3-206ENST00000506113 ATP1B4Q9UN42 357 aaPredicted RBP23.85■■□□□ 1.41
ABLIM3-206ENST00000506113 LOC105371045A0A1W2PR82 267 aa23.77■■□□□ 1.4
ABLIM3-206ENST00000506113 PPARGC1BQ86YN6 1023 aaKnown RBP23.69■■□□□ 1.38
ABLIM3-206ENST00000506113 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
ABLIM3-206ENST00000506113 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
ABLIM3-206ENST00000506113 ZEB1P37275 1124 aaPredicted RBP23.54■■□□□ 1.36
ABLIM3-206ENST00000506113 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
ABLIM3-206ENST00000506113 TRIM26Q12899 539 aaPredicted RBP23.45■■□□□ 1.34
ABLIM3-206ENST00000506113 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
ABLIM3-206ENST00000506113 ITGAEP38570 1179 aa23.16■■□□□ 1.3
ABLIM3-206ENST00000506113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.14■■□□□ 1.29
ABLIM3-206ENST00000506113 HNRNPUL2Q1KMD3 747 aaKnown RBP23.14■■□□□ 1.29
ABLIM3-206ENST00000506113 HRCP23327 699 aa23.04■■□□□ 1.28
ABLIM3-206ENST00000506113 PELP1Q8IZL8 1130 aaKnown RBP23.03■■□□□ 1.28
ABLIM3-206ENST00000506113 CENPBP07199 599 aaPredicted RBP22.94■■□□□ 1.26
ABLIM3-206ENST00000506113 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.26
ABLIM3-206ENST00000506113 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
ABLIM3-206ENST00000506113 NACADO15069 1562 aa22.75■■□□□ 1.23
ABLIM3-206ENST00000506113 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
ABLIM3-206ENST00000506113 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
ABLIM3-206ENST00000506113 YTHDC1Q96MU7 727 aaKnown RBP22.72■■□□□ 1.23
ABLIM3-206ENST00000506113 FAM50AQ14320 339 aaKnown RBP22.69■■□□□ 1.22
ABLIM3-206ENST00000506113 FBLN2P98095 1184 aa22.69■■□□□ 1.22
ABLIM3-206ENST00000506113 DCAF1Q9Y4B6 1507 aa22.63■■□□□ 1.21
ABLIM3-206ENST00000506113 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
ABLIM3-206ENST00000506113 POLR3GLQ9BT43 218 aa22.47■■□□□ 1.19
ABLIM3-206ENST00000506113 TRIM52Q96A61 297 aa22.41■■□□□ 1.18
ABLIM3-206ENST00000506113 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
ABLIM3-206ENST00000506113 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
ABLIM3-206ENST00000506113 NEFLP07196 543 aa22.38■■□□□ 1.17
ABLIM3-206ENST00000506113 NEUROD1Q13562 356 aa22.33■■□□□ 1.17
ABLIM3-206ENST00000506113 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
ABLIM3-206ENST00000506113 DIEXFQ68CQ4 756 aaKnown RBP22.29■■□□□ 1.16
ABLIM3-206ENST00000506113 CNGB1Q14028 1251 aaPredicted RBP22.29■■□□□ 1.16
ABLIM3-206ENST00000506113 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
ABLIM3-206ENST00000506113 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
ABLIM3-206ENST00000506113 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
ABLIM3-206ENST00000506113 CDK11AQ9UQ88 783 aaPredicted RBP22.15■■□□□ 1.14
ABLIM3-206ENST00000506113 ZNF777Q9ULD5 760 aaPredicted RBP22.11■■□□□ 1.13
ABLIM3-206ENST00000506113 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
ABLIM3-206ENST00000506113 EEA1Q15075 1411 aa22.09■■□□□ 1.13
ABLIM3-206ENST00000506113 CLIP1P30622 1438 aa22.07■■□□□ 1.12
ABLIM3-206ENST00000506113 ZNF326Q5BKZ1 582 aaKnown RBP22.06■■□□□ 1.12
ABLIM3-206ENST00000506113 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
ABLIM3-206ENST00000506113 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
ABLIM3-206ENST00000506113 ERICH6Q7L0X2 663 aa21.98■■□□□ 1.11
ABLIM3-206ENST00000506113 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
ABLIM3-206ENST00000506113 SLC4A1APQ9BWU0 796 aaKnown RBP21.97■■□□□ 1.11
ABLIM3-206ENST00000506113 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
ABLIM3-206ENST00000506113 KIF27Q86VH2 1401 aa21.93■■□□□ 1.1
ABLIM3-206ENST00000506113 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
ABLIM3-206ENST00000506113 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
ABLIM3-206ENST00000506113 TNIKQ9UKE5 1360 aa21.86■■□□□ 1.09
ABLIM3-206ENST00000506113 CHIC2Q9UKJ5 165 aa21.84■■□□□ 1.09
ABLIM3-206ENST00000506113 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
ABLIM3-206ENST00000506113 ANP32CO43423 234 aa21.81■■□□□ 1.08
ABLIM3-206ENST00000506113 SOGA1O94964 1423 aa21.8■■□□□ 1.08
ABLIM3-206ENST00000506113 NPM1P06748 294 aaKnown RBP eCLIP21.77■■□□□ 1.08
ABLIM3-206ENST00000506113 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
ABLIM3-206ENST00000506113 TONSLQ96HA7 1378 aa21.72■■□□□ 1.07
ABLIM3-206ENST00000506113 WIZO95785 1651 aa21.71■■□□□ 1.07
ABLIM3-206ENST00000506113 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
ABLIM3-206ENST00000506113 TSPY4P0CV99 314 aa21.67■■□□□ 1.06
ABLIM3-206ENST00000506113 TSPY10P0CW01 314 aa21.67■■□□□ 1.06
ABLIM3-206ENST00000506113 CUX2O14529 1486 aa21.66■■□□□ 1.06
ABLIM3-206ENST00000506113 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
ABLIM3-206ENST00000506113 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
ABLIM3-206ENST00000506113 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
ABLIM3-206ENST00000506113 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
ABLIM3-206ENST00000506113 PLEKHD1A6NEE1 506 aa21.59■■□□□ 1.05
ABLIM3-206ENST00000506113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.58■■□□□ 1.05
ABLIM3-206ENST00000506113 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.05
ABLIM3-206ENST00000506113 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
ABLIM3-206ENST00000506113 GTF3C3Q9Y5Q9 886 aa21.53■■□□□ 1.04
ABLIM3-206ENST00000506113 CHGAP10645 457 aaKnown RBP21.52■■□□□ 1.04
ABLIM3-206ENST00000506113 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
ABLIM3-206ENST00000506113 DDX10Q13206 875 aaKnown RBP21.51■■□□□ 1.03
ABLIM3-206ENST00000506113 BCANQ96GW7 911 aa21.5■■□□□ 1.03
ABLIM3-206ENST00000506113 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
ABLIM3-206ENST00000506113 PDS5BQ9NTI5 1447 aa21.48■■□□□ 1.03
ABLIM3-206ENST00000506113 ESF1Q9H501 851 aaKnown RBP21.47■■□□□ 1.03
ABLIM3-206ENST00000506113 CFDP1Q9UEE9 299 aaPredicted RBP21.46■■□□□ 1.03
ABLIM3-206ENST00000506113 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.03
ABLIM3-206ENST00000506113 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
ABLIM3-206ENST00000506113 KDM2AQ9Y2K7 1162 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms