RNA–Protein interactions for RNA: ENST00000290374.4

GJD2-201, Transcript of gap junction protein delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJD2, Length 2,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJD2-201ENST00000290374 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
GJD2-201ENST00000290374 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
GJD2-201ENST00000290374 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.76
GJD2-201ENST00000290374 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
GJD2-201ENST00000290374 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
GJD2-201ENST00000290374 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
GJD2-201ENST00000290374 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
GJD2-201ENST00000290374 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
GJD2-201ENST00000290374 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
GJD2-201ENST00000290374 PCGF6Q9BYE7 350 aa24.68■■□□□ 1.54
GJD2-201ENST00000290374 LOC105371045A0A1W2PR82 267 aa24.63■■□□□ 1.53
GJD2-201ENST00000290374 HRCP23327 699 aa24.59■■□□□ 1.53
GJD2-201ENST00000290374 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
GJD2-201ENST00000290374 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
GJD2-201ENST00000290374 ABCC9O60706 1549 aa24.22■■□□□ 1.47
GJD2-201ENST00000290374 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
GJD2-201ENST00000290374 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
GJD2-201ENST00000290374 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
GJD2-201ENST00000290374 EHMT2Q96KQ7 1210 aa24.05■■□□□ 1.44
GJD2-201ENST00000290374 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
GJD2-201ENST00000290374 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
GJD2-201ENST00000290374 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
GJD2-201ENST00000290374 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
GJD2-201ENST00000290374 NACADO15069 1562 aa23.7■■□□□ 1.38
GJD2-201ENST00000290374 WIZO95785 1651 aa23.6■■□□□ 1.37
GJD2-201ENST00000290374 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
GJD2-201ENST00000290374 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
GJD2-201ENST00000290374 TTBK1Q5TCY1 1321 aaPredicted RBP23.26■■□□□ 1.31
GJD2-201ENST00000290374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.21■■□□□ 1.31
GJD2-201ENST00000290374 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
GJD2-201ENST00000290374 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
GJD2-201ENST00000290374 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
GJD2-201ENST00000290374 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
GJD2-201ENST00000290374 TOP2AP11388 1531 aaKnown RBP23.1■■□□□ 1.29
GJD2-201ENST00000290374 SMARCA4P51532 1647 aa23.09■■□□□ 1.29
GJD2-201ENST00000290374 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
GJD2-201ENST00000290374 SOGA1O94964 1423 aa23.07■■□□□ 1.28
GJD2-201ENST00000290374 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
GJD2-201ENST00000290374 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
GJD2-201ENST00000290374 RUSC2Q8N2Y8 1516 aa22.97■■□□□ 1.27
GJD2-201ENST00000290374 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
GJD2-201ENST00000290374 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
GJD2-201ENST00000290374 CEP162Q5TB80 1403 aa22.94■■□□□ 1.26
GJD2-201ENST00000290374 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.25
GJD2-201ENST00000290374 SCAF1Q9H7N4 1312 aaKnown RBP22.82■■□□□ 1.24
GJD2-201ENST00000290374 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.24
GJD2-201ENST00000290374 BICRAQ9NZM4 1560 aa22.75■■□□□ 1.23
GJD2-201ENST00000290374 RANGAP1P46060 587 aaPredicted RBP22.71■■□□□ 1.23
GJD2-201ENST00000290374 EEA1Q15075 1411 aa22.69■■□□□ 1.22
GJD2-201ENST00000290374 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
GJD2-201ENST00000290374 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
GJD2-201ENST00000290374 HNRNPUL2Q1KMD3 747 aaKnown RBP22.61■■□□□ 1.21
GJD2-201ENST00000290374 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
GJD2-201ENST00000290374 NEUROD1Q13562 356 aa22.56■■□□□ 1.2
GJD2-201ENST00000290374 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
GJD2-201ENST00000290374 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
GJD2-201ENST00000290374 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
GJD2-201ENST00000290374 ACIN1Q9UKV3 1341 aaKnown RBP22.5■■□□□ 1.19
GJD2-201ENST00000290374 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
GJD2-201ENST00000290374 CLIP1P30622 1438 aa22.49■■□□□ 1.19
GJD2-201ENST00000290374 RAPGEF2Q9Y4G8 1499 aa22.44■■□□□ 1.18
GJD2-201ENST00000290374 APLP2Q06481 763 aa22.43■■□□□ 1.18
GJD2-201ENST00000290374 ZNF316A6NFI3 1004 aaPredicted RBP22.4■■□□□ 1.18
GJD2-201ENST00000290374 KIF21BO75037 1637 aa22.36■■□□□ 1.17
GJD2-201ENST00000290374 GTF3C3Q9Y5Q9 886 aa22.34■■□□□ 1.17
GJD2-201ENST00000290374 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
GJD2-201ENST00000290374 CENPBP07199 599 aaPredicted RBP22.31■■□□□ 1.16
GJD2-201ENST00000290374 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
GJD2-201ENST00000290374 MIER1Q8N108 512 aa22.2■■□□□ 1.14
GJD2-201ENST00000290374 PELP1Q8IZL8 1130 aaKnown RBP22.2■■□□□ 1.14
GJD2-201ENST00000290374 TOP2BQ02880 1626 aa22.19■■□□□ 1.14
GJD2-201ENST00000290374 KANK4Q5T7N3 995 aaPredicted RBP22.18■■□□□ 1.14
GJD2-201ENST00000290374 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
GJD2-201ENST00000290374 ARAP1Q96P48 1450 aa22.05■■□□□ 1.12
GJD2-201ENST00000290374 CUX1P39880 1505 aa22.05■■□□□ 1.12
GJD2-201ENST00000290374 ITGAEP38570 1179 aa22.04■■□□□ 1.12
GJD2-201ENST00000290374 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
GJD2-201ENST00000290374 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
GJD2-201ENST00000290374 KIF27Q86VH2 1401 aa22■■□□□ 1.11
GJD2-201ENST00000290374 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
GJD2-201ENST00000290374 DHX57Q6P158 1386 aaKnown RBP21.96■■□□□ 1.11
GJD2-201ENST00000290374 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
GJD2-201ENST00000290374 CFTRP13569 1480 aa21.92■■□□□ 1.1
GJD2-201ENST00000290374 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
GJD2-201ENST00000290374 IGF1RP08069 1367 aa21.83■■□□□ 1.08
GJD2-201ENST00000290374 CUX2O14529 1486 aa21.83■■□□□ 1.08
GJD2-201ENST00000290374 P3H3Q8IVL6 736 aa21.81■■□□□ 1.08
GJD2-201ENST00000290374 CCNB3Q8WWL7 1395 aa21.81■■□□□ 1.08
GJD2-201ENST00000290374 CLSPNQ9HAW4 1339 aa21.81■■□□□ 1.08
GJD2-201ENST00000290374 RRBP1Q9P2E9 1410 aaKnown RBP21.8■■□□□ 1.08
GJD2-201ENST00000290374 ATP1B4Q9UN42 357 aaPredicted RBP21.79■■□□□ 1.08
GJD2-201ENST00000290374 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
GJD2-201ENST00000290374 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
GJD2-201ENST00000290374 FAM50AQ14320 339 aaKnown RBP21.69■■□□□ 1.06
GJD2-201ENST00000290374 RAB3GAP2Q9H2M9 1393 aa21.68■■□□□ 1.06
GJD2-201ENST00000290374 FGD5Q6ZNL6 1462 aa21.67■■□□□ 1.06
GJD2-201ENST00000290374 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
GJD2-201ENST00000290374 PHLDB1Q86UU1 1377 aa21.61■■□□□ 1.05
GJD2-201ENST00000290374 KCNH8Q96L42 1107 aa21.58■■□□□ 1.04
GJD2-201ENST00000290374 TIAM1Q13009 1591 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms