Protein–RNA interactions for Protein: Q96L94

SNX22, Sorting nexin-22, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22Q96L94 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SNX22Q96L94 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.11□□□□□ -0.31
SNX22Q96L94 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SNX22Q96L94 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.11□□□□□ -0.31
SNX22Q96L94 RPL5P21-201ENST00000404620 815 ntBASIC13.11□□□□□ -0.31
SNX22Q96L94 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.11□□□□□ -0.31
SNX22Q96L94 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.11□□□□□ -0.31
SNX22Q96L94 AC092580.3-201ENST00000430932 139 ntBASIC13.11□□□□□ -0.31
SNX22Q96L94 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.11□□□□□ -0.31
SNX22Q96L94 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.11□□□□□ -0.31
SNX22Q96L94 IGHV3-42-201ENST00000520410 361 ntBASIC13.11□□□□□ -0.31
SNX22Q96L94 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.11□□□□□ -0.31
SNX22Q96L94 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.11□□□□□ -0.31
SNX22Q96L94 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
SNX22Q96L94 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SNX22Q96L94 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNX22Q96L94 AL590560.3-201ENST00000623350 461 ntBASIC13.11□□□□□ -0.31
SNX22Q96L94 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SNX22Q96L94 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.11□□□□□ -0.31
SNX22Q96L94 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNX22Q96L94 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.11□□□□□ -0.31
SNX22Q96L94 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX22Q96L94 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX22Q96L94 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX22Q96L94 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX22Q96L94 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX22Q96L94 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX22Q96L94 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
SNX22Q96L94 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX22Q96L94 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC074338.1-201ENST00000416825 156 ntBASIC13.1□□□□□ -0.31
SNX22Q96L94 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX22Q96L94 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC241585.1-201ENST00000433527 519 ntBASIC13.1□□□□□ -0.31
SNX22Q96L94 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX22Q96L94 ZNF890P-202ENST00000530367 1156 ntBASIC13.1□□□□□ -0.31
SNX22Q96L94 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX22Q96L94 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.1□□□□□ -0.31
SNX22Q96L94 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC100757.3-201ENST00000622361 1406 ntBASIC13.1□□□□□ -0.31
SNX22Q96L94 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SNX22Q96L94 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX22Q96L94 AC009090.5-201ENST00000624886 2285 ntBASIC13.1□□□□□ -0.31
SNX22Q96L94 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms