RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 NISCHQ9Y2I1 1504 aa36.15■■■■□ 3.38
CHRFAM7A-203ENST00000401522 CCDC180Q9P1Z9 1646 aa31.84■■■□□ 2.69
CHRFAM7A-203ENST00000401522 ABCC9O60706 1549 aa30.57■■■□□ 2.48
CHRFAM7A-203ENST00000401522 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
CHRFAM7A-203ENST00000401522 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
CHRFAM7A-203ENST00000401522 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
CHRFAM7A-203ENST00000401522 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
CHRFAM7A-203ENST00000401522 NACADO15069 1562 aa29.81■■■□□ 2.36
CHRFAM7A-203ENST00000401522 RB1CC1Q8TDY2 1594 aa29.68■■■□□ 2.34
CHRFAM7A-203ENST00000401522 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
CHRFAM7A-203ENST00000401522 UNC13AQ9UPW8 1703 aa29.01■■■□□ 2.23
CHRFAM7A-203ENST00000401522 SHROOM4Q9ULL8 1493 aa28.9■■■□□ 2.22
CHRFAM7A-203ENST00000401522 BICRAQ9NZM4 1560 aa28.77■■■□□ 2.2
CHRFAM7A-203ENST00000401522 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
CHRFAM7A-203ENST00000401522 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
CHRFAM7A-203ENST00000401522 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
CHRFAM7A-203ENST00000401522 EIF4G1Q04637 1599 aaKnown RBP27.96■■■□□ 2.07
CHRFAM7A-203ENST00000401522 SMARCA4P51532 1647 aa27.9■■■□□ 2.06
CHRFAM7A-203ENST00000401522 MROH2BQ7Z745 1585 aa27.87■■■□□ 2.05
CHRFAM7A-203ENST00000401522 RSF1Q96T23 1441 aaPredicted RBP27.79■■■□□ 2.04
CHRFAM7A-203ENST00000401522 CC2D2AQ9P2K1 1620 aa27.69■■■□□ 2.02
CHRFAM7A-203ENST00000401522 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
CHRFAM7A-203ENST00000401522 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
CHRFAM7A-203ENST00000401522 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
CHRFAM7A-203ENST00000401522 WIZO95785 1651 aa27.59■■■□□ 2.01
CHRFAM7A-203ENST00000401522 DNAJC5BQ9UF47 199 aa27.55■■■□□ 2
CHRFAM7A-203ENST00000401522 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
CHRFAM7A-203ENST00000401522 NCAPD3P42695 1498 aa27.52■■■□□ 2
CHRFAM7A-203ENST00000401522 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
CHRFAM7A-203ENST00000401522 BAZ1BQ9UIG0 1483 aaKnown RBP27.4■■□□□ 1.98
CHRFAM7A-203ENST00000401522 TOP2AP11388 1531 aaKnown RBP27.32■■□□□ 1.96
CHRFAM7A-203ENST00000401522 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
CHRFAM7A-203ENST00000401522 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
CHRFAM7A-203ENST00000401522 CFTRP13569 1480 aa26.72■■□□□ 1.87
CHRFAM7A-203ENST00000401522 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
CHRFAM7A-203ENST00000401522 NESP48681 1621 aa26.64■■□□□ 1.86
CHRFAM7A-203ENST00000401522 CHIC1Q5VXU3 224 aa26.57■■□□□ 1.84
CHRFAM7A-203ENST00000401522 PRDM2Q13029 1718 aa26.51■■□□□ 1.84
CHRFAM7A-203ENST00000401522 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
CHRFAM7A-203ENST00000401522 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
CHRFAM7A-203ENST00000401522 KIF21AQ7Z4S6 1674 aa26.32■■□□□ 1.8
CHRFAM7A-203ENST00000401522 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
CHRFAM7A-203ENST00000401522 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
CHRFAM7A-203ENST00000401522 ABCC8Q09428 1581 aa26.2■■□□□ 1.79
CHRFAM7A-203ENST00000401522 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
CHRFAM7A-203ENST00000401522 MRC2Q9UBG0 1479 aa26.15■■□□□ 1.78
CHRFAM7A-203ENST00000401522 URB2Q14146 1524 aaKnown RBP26.12■■□□□ 1.77
CHRFAM7A-203ENST00000401522 CUX1P39880 1505 aa26.09■■□□□ 1.77
CHRFAM7A-203ENST00000401522 THOC2Q8NI27 1593 aaKnown RBP26.09■■□□□ 1.77
CHRFAM7A-203ENST00000401522 DNMBPQ6XZF7 1577 aa26.08■■□□□ 1.77
CHRFAM7A-203ENST00000401522 TOPBP1Q92547 1522 aa26.07■■□□□ 1.76
CHRFAM7A-203ENST00000401522 SYNJ1O43426 1573 aa26.06■■□□□ 1.76
CHRFAM7A-203ENST00000401522 WDR62O43379 1518 aa26.05■■□□□ 1.76
CHRFAM7A-203ENST00000401522 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
CHRFAM7A-203ENST00000401522 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
CHRFAM7A-203ENST00000401522 TRIM41Q8WV44 630 aa26■■□□□ 1.75
CHRFAM7A-203ENST00000401522 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
CHRFAM7A-203ENST00000401522 POLA1P09884 1462 aaPredicted RBP25.89■■□□□ 1.74
CHRFAM7A-203ENST00000401522 CUX2O14529 1486 aa25.83■■□□□ 1.72
CHRFAM7A-203ENST00000401522 SOGA1O94964 1423 aa25.81■■□□□ 1.72
CHRFAM7A-203ENST00000401522 RAD54L2Q9Y4B4 1467 aa25.77■■□□□ 1.72
CHRFAM7A-203ENST00000401522 IFT140Q96RY7 1462 aa25.75■■□□□ 1.71
CHRFAM7A-203ENST00000401522 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
CHRFAM7A-203ENST00000401522 HRCP23327 699 aa25.74■■□□□ 1.71
CHRFAM7A-203ENST00000401522 ABCA10Q8WWZ4 1543 aa25.7■■□□□ 1.7
CHRFAM7A-203ENST00000401522 WDR97A6NE52 1622 aa25.65■■□□□ 1.7
CHRFAM7A-203ENST00000401522 LOC105371045A0A1W2PR82 267 aa25.65■■□□□ 1.7
CHRFAM7A-203ENST00000401522 PCGF6Q9BYE7 350 aa25.61■■□□□ 1.69
CHRFAM7A-203ENST00000401522 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
CHRFAM7A-203ENST00000401522 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.69
CHRFAM7A-203ENST00000401522 KIF27Q86VH2 1401 aa25.58■■□□□ 1.69
CHRFAM7A-203ENST00000401522 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
CHRFAM7A-203ENST00000401522 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
CHRFAM7A-203ENST00000401522 ABCA5Q8WWZ7 1642 aa25.53■■□□□ 1.68
CHRFAM7A-203ENST00000401522 GAPVD1Q14C86 1478 aa25.51■■□□□ 1.67
CHRFAM7A-203ENST00000401522 EEA1Q15075 1411 aa25.5■■□□□ 1.67
CHRFAM7A-203ENST00000401522 EIF4G3O43432 1585 aaKnown RBP25.49■■□□□ 1.67
CHRFAM7A-203ENST00000401522 IGF1RP08069 1367 aa25.42■■□□□ 1.66
CHRFAM7A-203ENST00000401522 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
CHRFAM7A-203ENST00000401522 FAM9AQ8IZU1 332 aaPredicted RBP25.41■■□□□ 1.66
CHRFAM7A-203ENST00000401522 ERICH3Q5RHP9 1530 aa25.41■■□□□ 1.66
CHRFAM7A-203ENST00000401522 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.66
CHRFAM7A-203ENST00000401522 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
CHRFAM7A-203ENST00000401522 TRIM26Q12899 539 aaPredicted RBP25.3■■□□□ 1.64
CHRFAM7A-203ENST00000401522 MAGI1Q96QZ7 1491 aaPredicted RBP25.29■■□□□ 1.64
CHRFAM7A-203ENST00000401522 SNAPC4Q5SXM2 1469 aa25.28■■□□□ 1.64
CHRFAM7A-203ENST00000401522 CUL7Q14999 1698 aa25.27■■□□□ 1.64
CHRFAM7A-203ENST00000401522 CARMIL1Q5VZK9 1371 aa25.27■■□□□ 1.64
CHRFAM7A-203ENST00000401522 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
CHRFAM7A-203ENST00000401522 FHAD1B1AJZ9 1412 aa25.24■■□□□ 1.63
CHRFAM7A-203ENST00000401522 ADAMTS12P58397 1594 aa25.23■■□□□ 1.63
CHRFAM7A-203ENST00000401522 SYNJ2O15056 1496 aa25.19■■□□□ 1.62
CHRFAM7A-203ENST00000401522 RAPGEF2Q9Y4G8 1499 aa25.17■■□□□ 1.62
CHRFAM7A-203ENST00000401522 KIF21BO75037 1637 aa25.17■■□□□ 1.62
CHRFAM7A-203ENST00000401522 CHMP7Q8WUX9 453 aaPredicted RBP25.14■■□□□ 1.61
CHRFAM7A-203ENST00000401522 FBLN2P98095 1184 aa25.1■■□□□ 1.61
CHRFAM7A-203ENST00000401522 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
CHRFAM7A-203ENST00000401522 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
CHRFAM7A-203ENST00000401522 CHD1O14646 1710 aa25.04■■□□□ 1.6
CHRFAM7A-203ENST00000401522 EHMT2Q96KQ7 1210 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms