RNA–Protein interactions for RNA: ENST00000350612.10

SUPT20H-201, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT20H, Length 2,739 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-201ENST00000350612 NISCHQ9Y2I1 1504 aa34.97■■■■□ 3.19
SUPT20H-201ENST00000350612 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
SUPT20H-201ENST00000350612 ZCCHC6Q5VYS8 1495 aaKnown RBP29.47■■■□□ 2.31
SUPT20H-201ENST00000350612 DCAF1Q9Y4B6 1507 aa29.11■■■□□ 2.25
SUPT20H-201ENST00000350612 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
SUPT20H-201ENST00000350612 DCAF8L2P0C7V8 631 aa28.35■■■□□ 2.13
SUPT20H-201ENST00000350612 NACADO15069 1562 aa28.34■■■□□ 2.13
SUPT20H-201ENST00000350612 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
SUPT20H-201ENST00000350612 ABCC9O60706 1549 aa28.29■■■□□ 2.12
SUPT20H-201ENST00000350612 RB1CC1Q8TDY2 1594 aa28.01■■■□□ 2.07
SUPT20H-201ENST00000350612 SCRIBQ14160 1630 aa27.87■■■□□ 2.05
SUPT20H-201ENST00000350612 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
SUPT20H-201ENST00000350612 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
SUPT20H-201ENST00000350612 RSF1Q96T23 1441 aaPredicted RBP27.14■■□□□ 1.94
SUPT20H-201ENST00000350612 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
SUPT20H-201ENST00000350612 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
SUPT20H-201ENST00000350612 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
SUPT20H-201ENST00000350612 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
SUPT20H-201ENST00000350612 SMARCA4P51532 1647 aa26.86■■□□□ 1.89
SUPT20H-201ENST00000350612 WIZO95785 1651 aa26.75■■□□□ 1.87
SUPT20H-201ENST00000350612 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
SUPT20H-201ENST00000350612 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
SUPT20H-201ENST00000350612 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.85
SUPT20H-201ENST00000350612 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
SUPT20H-201ENST00000350612 SMARCA2P51531 1590 aa26.39■■□□□ 1.82
SUPT20H-201ENST00000350612 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
SUPT20H-201ENST00000350612 EIF4G1Q04637 1599 aaKnown RBP26.28■■□□□ 1.8
SUPT20H-201ENST00000350612 CCDC88BA6NC98 1476 aa26.2■■□□□ 1.79
SUPT20H-201ENST00000350612 HMGXB3Q12766 1538 aa26.15■■□□□ 1.78
SUPT20H-201ENST00000350612 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
SUPT20H-201ENST00000350612 NCAPD3P42695 1498 aa26.08■■□□□ 1.77
SUPT20H-201ENST00000350612 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
SUPT20H-201ENST00000350612 CC2D2AQ9P2K1 1620 aa25.76■■□□□ 1.71
SUPT20H-201ENST00000350612 ABCC8Q09428 1581 aa25.66■■□□□ 1.7
SUPT20H-201ENST00000350612 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
SUPT20H-201ENST00000350612 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
SUPT20H-201ENST00000350612 CFTRP13569 1480 aa25.55■■□□□ 1.68
SUPT20H-201ENST00000350612 EEA1Q15075 1411 aa25.48■■□□□ 1.67
SUPT20H-201ENST00000350612 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
SUPT20H-201ENST00000350612 SYNJ1O43426 1573 aa25.45■■□□□ 1.67
SUPT20H-201ENST00000350612 TOP2BQ02880 1626 aa25.43■■□□□ 1.66
SUPT20H-201ENST00000350612 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
SUPT20H-201ENST00000350612 LOC105371045A0A1W2PR82 267 aa25.31■■□□□ 1.64
SUPT20H-201ENST00000350612 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
SUPT20H-201ENST00000350612 CUX1P39880 1505 aa25.21■■□□□ 1.63
SUPT20H-201ENST00000350612 SOGA1O94964 1423 aa25.2■■□□□ 1.62
SUPT20H-201ENST00000350612 FAM9AQ8IZU1 332 aaPredicted RBP25.19■■□□□ 1.62
SUPT20H-201ENST00000350612 KIF21BO75037 1637 aa25.14■■□□□ 1.61
SUPT20H-201ENST00000350612 CSRNP3Q8WYN3 585 aa25.08■■□□□ 1.61
SUPT20H-201ENST00000350612 FANCD2Q9BXW9 1451 aa25.07■■□□□ 1.6
SUPT20H-201ENST00000350612 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
SUPT20H-201ENST00000350612 GOLGA3Q08378 1498 aa25.04■■□□□ 1.6
SUPT20H-201ENST00000350612 CEP164Q9UPV0 1460 aa25.03■■□□□ 1.6
SUPT20H-201ENST00000350612 DNMBPQ6XZF7 1577 aa25■■□□□ 1.59
SUPT20H-201ENST00000350612 TNIKQ9UKE5 1360 aa24.99■■□□□ 1.59
SUPT20H-201ENST00000350612 ERICH3Q5RHP9 1530 aa24.93■■□□□ 1.58
SUPT20H-201ENST00000350612 NESP48681 1621 aa24.92■■□□□ 1.58
SUPT20H-201ENST00000350612 KIF27Q86VH2 1401 aa24.91■■□□□ 1.58
SUPT20H-201ENST00000350612 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
SUPT20H-201ENST00000350612 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
SUPT20H-201ENST00000350612 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
SUPT20H-201ENST00000350612 PRXQ9BXM0 1461 aa24.83■■□□□ 1.57
SUPT20H-201ENST00000350612 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
SUPT20H-201ENST00000350612 KIF21AQ7Z4S6 1674 aa24.8■■□□□ 1.56
SUPT20H-201ENST00000350612 ABCA10Q8WWZ4 1543 aa24.75■■□□□ 1.55
SUPT20H-201ENST00000350612 WDR97A6NE52 1622 aa24.74■■□□□ 1.55
SUPT20H-201ENST00000350612 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
SUPT20H-201ENST00000350612 RAPGEF2Q9Y4G8 1499 aa24.73■■□□□ 1.55
SUPT20H-201ENST00000350612 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
SUPT20H-201ENST00000350612 CUX2O14529 1486 aa24.72■■□□□ 1.55
SUPT20H-201ENST00000350612 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
SUPT20H-201ENST00000350612 EHMT2Q96KQ7 1210 aa24.67■■□□□ 1.54
SUPT20H-201ENST00000350612 DNAJC5BQ9UF47 199 aa24.66■■□□□ 1.54
SUPT20H-201ENST00000350612 CUL7Q14999 1698 aa24.61■■□□□ 1.53
SUPT20H-201ENST00000350612 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
SUPT20H-201ENST00000350612 IGF1RP08069 1367 aa24.6■■□□□ 1.53
SUPT20H-201ENST00000350612 TRIM26Q12899 539 aaPredicted RBP24.58■■□□□ 1.53
SUPT20H-201ENST00000350612 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
SUPT20H-201ENST00000350612 CLIP1P30622 1438 aa24.56■■□□□ 1.52
SUPT20H-201ENST00000350612 RAD54L2Q9Y4B4 1467 aa24.55■■□□□ 1.52
SUPT20H-201ENST00000350612 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
SUPT20H-201ENST00000350612 WDR62O43379 1518 aa24.51■■□□□ 1.51
SUPT20H-201ENST00000350612 CARMIL1Q5VZK9 1371 aa24.48■■□□□ 1.51
SUPT20H-201ENST00000350612 VPS8Q8N3P4 1428 aa24.44■■□□□ 1.5
SUPT20H-201ENST00000350612 PCGF6Q9BYE7 350 aa24.44■■□□□ 1.5
SUPT20H-201ENST00000350612 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
SUPT20H-201ENST00000350612 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
SUPT20H-201ENST00000350612 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
SUPT20H-201ENST00000350612 IFT140Q96RY7 1462 aa24.36■■□□□ 1.49
SUPT20H-201ENST00000350612 CTTNBP2Q8WZ74 1663 aa24.36■■□□□ 1.49
SUPT20H-201ENST00000350612 ARAP1Q96P48 1450 aa24.33■■□□□ 1.48
SUPT20H-201ENST00000350612 ERCC6Q03468 1493 aa24.3■■□□□ 1.48
SUPT20H-201ENST00000350612 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
SUPT20H-201ENST00000350612 EFCAB5A4FU69 1503 aa24.25■■□□□ 1.47
SUPT20H-201ENST00000350612 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
SUPT20H-201ENST00000350612 ADAMTS12P58397 1594 aa24.21■■□□□ 1.47
SUPT20H-201ENST00000350612 GRIN2BQ13224 1484 aa24.2■■□□□ 1.46
SUPT20H-201ENST00000350612 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
SUPT20H-201ENST00000350612 MAP3K1Q13233 1512 aa24.14■■□□□ 1.45
SUPT20H-201ENST00000350612 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms