RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 NISCHQ9Y2I1 1504 aa37.46■■■■□ 3.59
AP001056.1-201ENST00000411956 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
AP001056.1-201ENST00000411956 ABCC9O60706 1549 aa31.81■■■□□ 2.68
AP001056.1-201ENST00000411956 ZCCHC6Q5VYS8 1495 aaKnown RBP31.37■■■□□ 2.61
AP001056.1-201ENST00000411956 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
AP001056.1-201ENST00000411956 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
AP001056.1-201ENST00000411956 NACADO15069 1562 aa30.95■■■□□ 2.54
AP001056.1-201ENST00000411956 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
AP001056.1-201ENST00000411956 RB1CC1Q8TDY2 1594 aa30.85■■■□□ 2.53
AP001056.1-201ENST00000411956 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
AP001056.1-201ENST00000411956 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
AP001056.1-201ENST00000411956 BICRAQ9NZM4 1560 aa29.93■■■□□ 2.38
AP001056.1-201ENST00000411956 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
AP001056.1-201ENST00000411956 PABPN1Q86U42 306 aaKnown RBP eCLIP29.76■■■□□ 2.35
AP001056.1-201ENST00000411956 CECR2Q9BXF3 1484 aa29.12■■■□□ 2.25
AP001056.1-201ENST00000411956 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
AP001056.1-201ENST00000411956 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.23
AP001056.1-201ENST00000411956 SMARCA4P51532 1647 aa28.98■■■□□ 2.23
AP001056.1-201ENST00000411956 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.22
AP001056.1-201ENST00000411956 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
AP001056.1-201ENST00000411956 RSF1Q96T23 1441 aaPredicted RBP28.73■■■□□ 2.19
AP001056.1-201ENST00000411956 PEG3Q9GZU2 1588 aa28.69■■■□□ 2.18
AP001056.1-201ENST00000411956 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
AP001056.1-201ENST00000411956 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
AP001056.1-201ENST00000411956 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
AP001056.1-201ENST00000411956 WIZO95785 1651 aa28.63■■■□□ 2.17
AP001056.1-201ENST00000411956 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
AP001056.1-201ENST00000411956 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
AP001056.1-201ENST00000411956 BAZ1BQ9UIG0 1483 aaKnown RBP28.45■■■□□ 2.14
AP001056.1-201ENST00000411956 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
AP001056.1-201ENST00000411956 SUPT5HO00267 1087 aaKnown RBP28.36■■■□□ 2.13
AP001056.1-201ENST00000411956 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
AP001056.1-201ENST00000411956 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
AP001056.1-201ENST00000411956 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
AP001056.1-201ENST00000411956 NESP48681 1621 aa27.7■■■□□ 2.03
AP001056.1-201ENST00000411956 CFTRP13569 1480 aa27.7■■■□□ 2.02
AP001056.1-201ENST00000411956 PRDM2Q13029 1718 aa27.6■■■□□ 2.01
AP001056.1-201ENST00000411956 PDS5BQ9NTI5 1447 aa27.46■■□□□ 1.99
AP001056.1-201ENST00000411956 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
AP001056.1-201ENST00000411956 FANCD2Q9BXW9 1451 aa27.43■■□□□ 1.98
AP001056.1-201ENST00000411956 ERCC6Q03468 1493 aa27.36■■□□□ 1.97
AP001056.1-201ENST00000411956 CEP164Q9UPV0 1460 aa27.35■■□□□ 1.97
AP001056.1-201ENST00000411956 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
AP001056.1-201ENST00000411956 MRC2Q9UBG0 1479 aa27.2■■□□□ 1.95
AP001056.1-201ENST00000411956 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
AP001056.1-201ENST00000411956 URB2Q14146 1524 aaKnown RBP27.14■■□□□ 1.94
AP001056.1-201ENST00000411956 WDR62O43379 1518 aa27.12■■□□□ 1.93
AP001056.1-201ENST00000411956 DNMBPQ6XZF7 1577 aa27.1■■□□□ 1.93
AP001056.1-201ENST00000411956 WRNQ14191 1432 aaPredicted RBP eCLIP27.08■■□□□ 1.93
AP001056.1-201ENST00000411956 CUX1P39880 1505 aa27.08■■□□□ 1.93
AP001056.1-201ENST00000411956 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
AP001056.1-201ENST00000411956 SYNJ1O43426 1573 aa27.04■■□□□ 1.92
AP001056.1-201ENST00000411956 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.92
AP001056.1-201ENST00000411956 TOP2BQ02880 1626 aa27■■□□□ 1.91
AP001056.1-201ENST00000411956 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.9
AP001056.1-201ENST00000411956 CUX2O14529 1486 aa26.88■■□□□ 1.89
AP001056.1-201ENST00000411956 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
AP001056.1-201ENST00000411956 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
AP001056.1-201ENST00000411956 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
AP001056.1-201ENST00000411956 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
AP001056.1-201ENST00000411956 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
AP001056.1-201ENST00000411956 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
AP001056.1-201ENST00000411956 SOGA1O94964 1423 aa26.73■■□□□ 1.87
AP001056.1-201ENST00000411956 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
AP001056.1-201ENST00000411956 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
AP001056.1-201ENST00000411956 ZNF608Q9ULD9 1512 aaPredicted RBP26.59■■□□□ 1.85
AP001056.1-201ENST00000411956 EIF4G3O43432 1585 aaKnown RBP26.56■■□□□ 1.84
AP001056.1-201ENST00000411956 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
AP001056.1-201ENST00000411956 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
AP001056.1-201ENST00000411956 AQRO60306 1485 aaKnown RBP eCLIP26.48■■□□□ 1.83
AP001056.1-201ENST00000411956 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
AP001056.1-201ENST00000411956 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
AP001056.1-201ENST00000411956 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
AP001056.1-201ENST00000411956 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
AP001056.1-201ENST00000411956 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
AP001056.1-201ENST00000411956 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
AP001056.1-201ENST00000411956 EEA1Q15075 1411 aa26.33■■□□□ 1.81
AP001056.1-201ENST00000411956 DNAJC5Q9H3Z4 198 aa26.31■■□□□ 1.8
AP001056.1-201ENST00000411956 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
AP001056.1-201ENST00000411956 ADAMTS12P58397 1594 aa26.26■■□□□ 1.79
AP001056.1-201ENST00000411956 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
AP001056.1-201ENST00000411956 IGF1RP08069 1367 aa26.25■■□□□ 1.79
AP001056.1-201ENST00000411956 CUL7Q14999 1698 aa26.25■■□□□ 1.79
AP001056.1-201ENST00000411956 FAM9AQ8IZU1 332 aaPredicted RBP26.2■■□□□ 1.78
AP001056.1-201ENST00000411956 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
AP001056.1-201ENST00000411956 CSRNP3Q8WYN3 585 aa26.15■■□□□ 1.78
AP001056.1-201ENST00000411956 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
AP001056.1-201ENST00000411956 PRXQ9BXM0 1461 aa26.11■■□□□ 1.77
AP001056.1-201ENST00000411956 CARMIL1Q5VZK9 1371 aa26.11■■□□□ 1.77
AP001056.1-201ENST00000411956 CHD1O14646 1710 aa26.11■■□□□ 1.77
AP001056.1-201ENST00000411956 KIF21BO75037 1637 aa26.06■■□□□ 1.76
AP001056.1-201ENST00000411956 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
AP001056.1-201ENST00000411956 RAPGEF2Q9Y4G8 1499 aa26.05■■□□□ 1.76
AP001056.1-201ENST00000411956 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
AP001056.1-201ENST00000411956 FBLN2P98095 1184 aa25.98■■□□□ 1.75
AP001056.1-201ENST00000411956 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
AP001056.1-201ENST00000411956 GOLGA3Q08378 1498 aa25.92■■□□□ 1.74
AP001056.1-201ENST00000411956 NUP160Q12769 1436 aa25.91■■□□□ 1.74
AP001056.1-201ENST00000411956 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
AP001056.1-201ENST00000411956 CLASP1Q7Z460 1538 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms