RNA–Protein interactions for RNA: ENST00000374221.7

UBXN11-205, Transcript of UBX domain protein 11, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBXN11, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-205ENST00000374221 NISCHQ9Y2I1 1504 aa38.17■■■■□ 3.7
UBXN11-205ENST00000374221 CCDC180Q9P1Z9 1646 aa33.67■■■□□ 2.98
UBXN11-205ENST00000374221 ABCC9O60706 1549 aa32.87■■■□□ 2.85
UBXN11-205ENST00000374221 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.69
UBXN11-205ENST00000374221 ZCCHC6Q5VYS8 1495 aaKnown RBP31.86■■■□□ 2.69
UBXN11-205ENST00000374221 NACADO15069 1562 aa31.61■■■□□ 2.65
UBXN11-205ENST00000374221 RB1CC1Q8TDY2 1594 aa31.58■■■□□ 2.65
UBXN11-205ENST00000374221 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
UBXN11-205ENST00000374221 MYO15BQ96JP2 1530 aa31.48■■■□□ 2.63
UBXN11-205ENST00000374221 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
UBXN11-205ENST00000374221 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
UBXN11-205ENST00000374221 PABPN1Q86U42 306 aaKnown RBP eCLIP30.83■■■□□ 2.539e-7■■■□□ 16.4
UBXN11-205ENST00000374221 BICRAQ9NZM4 1560 aa30.75■■■□□ 2.51
UBXN11-205ENST00000374221 SHROOM4Q9ULL8 1493 aa30.52■■■□□ 2.48
UBXN11-205ENST00000374221 DNAJC5BQ9UF47 199 aa30.02■■■□□ 2.4
UBXN11-205ENST00000374221 EIF4G1Q04637 1599 aaKnown RBP29.87■■■□□ 2.37
UBXN11-205ENST00000374221 CECR2Q9BXF3 1484 aa29.82■■■□□ 2.36
UBXN11-205ENST00000374221 CC2D2AQ9P2K1 1620 aa29.68■■■□□ 2.34
UBXN11-205ENST00000374221 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
UBXN11-205ENST00000374221 BAZ1AQ9NRL2 1556 aaPredicted RBP29.5■■■□□ 2.31
UBXN11-205ENST00000374221 MROH2BQ7Z745 1585 aa29.49■■■□□ 2.31
UBXN11-205ENST00000374221 ATAD2BQ9ULI0 1458 aa29.33■■■□□ 2.29
UBXN11-205ENST00000374221 RSF1Q96T23 1441 aaPredicted RBP29.25■■■□□ 2.27
UBXN11-205ENST00000374221 NCAPD3P42695 1498 aa29.22■■■□□ 2.27
UBXN11-205ENST00000374221 SMARCA2P51531 1590 aa29.21■■■□□ 2.27
UBXN11-205ENST00000374221 PEG3Q9GZU2 1588 aa29.2■■■□□ 2.26
UBXN11-205ENST00000374221 WIZO95785 1651 aa29.18■■■□□ 2.26
UBXN11-205ENST00000374221 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
UBXN11-205ENST00000374221 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
UBXN11-205ENST00000374221 SUPT5HO00267 1087 aaKnown RBP28.83■■■□□ 2.21
UBXN11-205ENST00000374221 TOP2AP11388 1531 aaKnown RBP28.8■■■□□ 2.2
UBXN11-205ENST00000374221 NESP48681 1621 aa28.57■■■□□ 2.16
UBXN11-205ENST00000374221 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
UBXN11-205ENST00000374221 CADPSQ9ULU8 1353 aa28.41■■■□□ 2.14
UBXN11-205ENST00000374221 LAMC3Q9Y6N6 1575 aa28.35■■■□□ 2.13
UBXN11-205ENST00000374221 CFTRP13569 1480 aa28.3■■■□□ 2.12
UBXN11-205ENST00000374221 ERCC6Q03468 1493 aa28.21■■■□□ 2.11
UBXN11-205ENST00000374221 PDS5BQ9NTI5 1447 aa28.16■■■□□ 2.1
UBXN11-205ENST00000374221 KIF21AQ7Z4S6 1674 aa28.15■■■□□ 2.1
UBXN11-205ENST00000374221 FANCD2Q9BXW9 1451 aa28.1■■■□□ 2.09
UBXN11-205ENST00000374221 PRDM2Q13029 1718 aa28■■■□□ 2.07
UBXN11-205ENST00000374221 CEP164Q9UPV0 1460 aa27.99■■■□□ 2.07
UBXN11-205ENST00000374221 THOC2Q8NI27 1593 aaKnown RBP27.96■■■□□ 2.07
UBXN11-205ENST00000374221 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.06
UBXN11-205ENST00000374221 URB2Q14146 1524 aaKnown RBP27.85■■■□□ 2.05
UBXN11-205ENST00000374221 WDR62O43379 1518 aa27.79■■■□□ 2.04
UBXN11-205ENST00000374221 CUX2O14529 1486 aa27.73■■■□□ 2.03
UBXN11-205ENST00000374221 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
UBXN11-205ENST00000374221 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
UBXN11-205ENST00000374221 CUX1P39880 1505 aa27.64■■■□□ 2.01
UBXN11-205ENST00000374221 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
UBXN11-205ENST00000374221 WRNQ14191 1432 aaPredicted RBP eCLIP27.53■■■□□ 2
UBXN11-205ENST00000374221 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
UBXN11-205ENST00000374221 POLA1P09884 1462 aaPredicted RBP27.49■■□□□ 1.99
UBXN11-205ENST00000374221 FGD5Q6ZNL6 1462 aa27.47■■□□□ 1.99
UBXN11-205ENST00000374221 RAD54L2Q9Y4B4 1467 aa27.43■■□□□ 1.98
UBXN11-205ENST00000374221 TOP2BQ02880 1626 aa27.4■■□□□ 1.98
UBXN11-205ENST00000374221 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
UBXN11-205ENST00000374221 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
UBXN11-205ENST00000374221 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
UBXN11-205ENST00000374221 TARBP1Q13395 1621 aaKnown RBP27.36■■□□□ 1.97
UBXN11-205ENST00000374221 SOGA1O94964 1423 aa27.36■■□□□ 1.97
UBXN11-205ENST00000374221 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
UBXN11-205ENST00000374221 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.954e-14■■■■■ 52.8
UBXN11-205ENST00000374221 EIF4G3O43432 1585 aaKnown RBP27.19■■□□□ 1.94
UBXN11-205ENST00000374221 WDR97A6NE52 1622 aa27.18■■□□□ 1.94
UBXN11-205ENST00000374221 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
UBXN11-205ENST00000374221 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
UBXN11-205ENST00000374221 CHIC1Q5VXU3 224 aa27.05■■□□□ 1.92
UBXN11-205ENST00000374221 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
UBXN11-205ENST00000374221 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
UBXN11-205ENST00000374221 GRIN2BQ13224 1484 aa26.96■■□□□ 1.91
UBXN11-205ENST00000374221 SNAPC4Q5SXM2 1469 aa26.95■■□□□ 1.9
UBXN11-205ENST00000374221 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
UBXN11-205ENST00000374221 RUSC2Q8N2Y8 1516 aa26.92■■□□□ 1.9
UBXN11-205ENST00000374221 KIF27Q86VH2 1401 aa26.88■■□□□ 1.89
UBXN11-205ENST00000374221 FBLN2P98095 1184 aa26.85■■□□□ 1.89
UBXN11-205ENST00000374221 MAGI1Q96QZ7 1491 aaPredicted RBP26.83■■□□□ 1.89
UBXN11-205ENST00000374221 IGF1RP08069 1367 aa26.82■■□□□ 1.88
UBXN11-205ENST00000374221 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
UBXN11-205ENST00000374221 CHD1O14646 1710 aa26.79■■□□□ 1.88
UBXN11-205ENST00000374221 ADAMTS12P58397 1594 aa26.76■■□□□ 1.87
UBXN11-205ENST00000374221 SYNJ2O15056 1496 aa26.76■■□□□ 1.87
UBXN11-205ENST00000374221 CHMP7Q8WUX9 453 aaPredicted RBP26.75■■□□□ 1.87
UBXN11-205ENST00000374221 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
UBXN11-205ENST00000374221 OSCARQ8IYS5 282 aa26.71■■□□□ 1.87
UBXN11-205ENST00000374221 FAM9AQ8IZU1 332 aaPredicted RBP26.67■■□□□ 1.86
UBXN11-205ENST00000374221 GRIN2AQ12879 1464 aa26.65■■□□□ 1.86
UBXN11-205ENST00000374221 DNAJC5Q9H3Z4 198 aa26.63■■□□□ 1.85
UBXN11-205ENST00000374221 CARMIL1Q5VZK9 1371 aa26.63■■□□□ 1.85
UBXN11-205ENST00000374221 CUL7Q14999 1698 aa26.6■■□□□ 1.85
UBXN11-205ENST00000374221 CSRNP3Q8WYN3 585 aa26.55■■□□□ 1.84
UBXN11-205ENST00000374221 CEP170Q5SW79 1584 aa26.55■■□□□ 1.84
UBXN11-205ENST00000374221 NUP160Q12769 1436 aa26.51■■□□□ 1.83
UBXN11-205ENST00000374221 CLASP1Q7Z460 1538 aa26.5■■□□□ 1.83
UBXN11-205ENST00000374221 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
UBXN11-205ENST00000374221 EEA1Q15075 1411 aa26.49■■□□□ 1.83
UBXN11-205ENST00000374221 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
UBXN11-205ENST00000374221 EHMT2Q96KQ7 1210 aa26.39■■□□□ 1.82
UBXN11-205ENST00000374221 KIAA0586Q9BVV6 1533 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms