RNA–Protein interactions for RNA: ENST00000238044.7

C2orf40-201, Transcript of chromosome 2 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf40, Length 789 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf40-201ENST00000238044 NISCHQ9Y2I1 1504 aa38.69■■■■□ 3.78
C2orf40-201ENST00000238044 CCDC180Q9P1Z9 1646 aa34.47■■■■□ 3.11
C2orf40-201ENST00000238044 ABCC9O60706 1549 aa33.92■■■■□ 3.02
C2orf40-201ENST00000238044 DCAF8L2P0C7V8 631 aa32.63■■■□□ 2.81
C2orf40-201ENST00000238044 RB1CC1Q8TDY2 1594 aa32.53■■■□□ 2.8
C2orf40-201ENST00000238044 NACADO15069 1562 aa32.41■■■□□ 2.78
C2orf40-201ENST00000238044 ZCCHC6Q5VYS8 1495 aaKnown RBP32.18■■■□□ 2.74
C2orf40-201ENST00000238044 MYO15BQ96JP2 1530 aa32.06■■■□□ 2.72
C2orf40-201ENST00000238044 DCAF1Q9Y4B6 1507 aa31.91■■■□□ 2.7
C2orf40-201ENST00000238044 UNC13AQ9UPW8 1703 aa31.85■■■□□ 2.69
C2orf40-201ENST00000238044 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
C2orf40-201ENST00000238044 SCRIBQ14160 1630 aa31.55■■■□□ 2.64
C2orf40-201ENST00000238044 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
C2orf40-201ENST00000238044 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
C2orf40-201ENST00000238044 SHROOM4Q9ULL8 1493 aa31.05■■■□□ 2.56
C2orf40-201ENST00000238044 EIF4G1Q04637 1599 aaKnown RBP30.7■■■□□ 2.5
C2orf40-201ENST00000238044 CC2D2AQ9P2K1 1620 aa30.64■■■□□ 2.5
C2orf40-201ENST00000238044 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
C2orf40-201ENST00000238044 SMARCA4P51532 1647 aa30.09■■■□□ 2.41
C2orf40-201ENST00000238044 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
C2orf40-201ENST00000238044 ATAD2BQ9ULI0 1458 aa29.9■■■□□ 2.38
C2orf40-201ENST00000238044 SMARCA2P51531 1590 aa29.89■■■□□ 2.38
C2orf40-201ENST00000238044 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
C2orf40-201ENST00000238044 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
C2orf40-201ENST00000238044 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
C2orf40-201ENST00000238044 BAZ1BQ9UIG0 1483 aaKnown RBP29.73■■■□□ 2.35
C2orf40-201ENST00000238044 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
C2orf40-201ENST00000238044 WIZO95785 1651 aa29.6■■■□□ 2.33
C2orf40-201ENST00000238044 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
C2orf40-201ENST00000238044 NESP48681 1621 aa29.29■■■□□ 2.28
C2orf40-201ENST00000238044 ERCC6Q03468 1493 aa29.27■■■□□ 2.28
C2orf40-201ENST00000238044 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.26
C2orf40-201ENST00000238044 LAMC3Q9Y6N6 1575 aa29.16■■■□□ 2.26
C2orf40-201ENST00000238044 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
C2orf40-201ENST00000238044 DNAJC5Q9H3Z4 198 aa29.02■■■□□ 2.24
C2orf40-201ENST00000238044 KIF21AQ7Z4S6 1674 aa28.99■■■□□ 2.23
C2orf40-201ENST00000238044 PDS5BQ9NTI5 1447 aa28.97■■■□□ 2.23
C2orf40-201ENST00000238044 CUX2O14529 1486 aa28.95■■■□□ 2.22
C2orf40-201ENST00000238044 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
C2orf40-201ENST00000238044 SUPT5HO00267 1087 aaKnown RBP28.83■■■□□ 2.21
C2orf40-201ENST00000238044 THOC2Q8NI27 1593 aaKnown RBP28.82■■■□□ 2.2
C2orf40-201ENST00000238044 CFTRP13569 1480 aa28.8■■■□□ 2.2
C2orf40-201ENST00000238044 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
C2orf40-201ENST00000238044 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
C2orf40-201ENST00000238044 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
C2orf40-201ENST00000238044 MRC2Q9UBG0 1479 aa28.68■■■□□ 2.18
C2orf40-201ENST00000238044 WDR62O43379 1518 aa28.55■■■□□ 2.16
C2orf40-201ENST00000238044 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
C2orf40-201ENST00000238044 TOPBP1Q92547 1522 aa28.27■■■□□ 2.12
C2orf40-201ENST00000238044 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
C2orf40-201ENST00000238044 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
C2orf40-201ENST00000238044 DNMBPQ6XZF7 1577 aa28.23■■■□□ 2.11
C2orf40-201ENST00000238044 IFT140Q96RY7 1462 aa28.09■■■□□ 2.09
C2orf40-201ENST00000238044 CUX1P39880 1505 aa28.01■■■□□ 2.07
C2orf40-201ENST00000238044 ZNF608Q9ULD9 1512 aaPredicted RBP28■■■□□ 2.07
C2orf40-201ENST00000238044 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
C2orf40-201ENST00000238044 FGD5Q6ZNL6 1462 aa27.95■■■□□ 2.07
C2orf40-201ENST00000238044 TARBP1Q13395 1621 aaKnown RBP27.94■■■□□ 2.06
C2orf40-201ENST00000238044 SOGA1O94964 1423 aa27.93■■■□□ 2.06
C2orf40-201ENST00000238044 RAD54L2Q9Y4B4 1467 aa27.93■■■□□ 2.06
C2orf40-201ENST00000238044 EIF4G3O43432 1585 aaKnown RBP27.91■■■□□ 2.06
C2orf40-201ENST00000238044 AQRO60306 1485 aaKnown RBP eCLIP27.85■■■□□ 2.05
C2orf40-201ENST00000238044 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
C2orf40-201ENST00000238044 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
C2orf40-201ENST00000238044 BIVM-ERCC5R4GMW8 1640 aa27.75■■■□□ 2.03
C2orf40-201ENST00000238044 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
C2orf40-201ENST00000238044 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
C2orf40-201ENST00000238044 OSCARQ8IYS5 282 aa27.73■■■□□ 2.03
C2orf40-201ENST00000238044 WDR97A6NE52 1622 aa27.71■■■□□ 2.03
C2orf40-201ENST00000238044 FBLN2P98095 1184 aa27.68■■■□□ 2.02
C2orf40-201ENST00000238044 CHD1O14646 1710 aa27.64■■■□□ 2.02
C2orf40-201ENST00000238044 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
C2orf40-201ENST00000238044 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
C2orf40-201ENST00000238044 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
C2orf40-201ENST00000238044 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
C2orf40-201ENST00000238044 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
C2orf40-201ENST00000238044 GRIN2BQ13224 1484 aa27.59■■■□□ 2.01
C2orf40-201ENST00000238044 ABCA5Q8WWZ7 1642 aa27.55■■■□□ 2
C2orf40-201ENST00000238044 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
C2orf40-201ENST00000238044 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
C2orf40-201ENST00000238044 SYNJ2O15056 1496 aa27.41■■□□□ 1.98
C2orf40-201ENST00000238044 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
C2orf40-201ENST00000238044 RIMBP3CA6NJZ7 1639 aa27.3■■□□□ 1.96
C2orf40-201ENST00000238044 RIMBP3BA6NNM3 1639 aa27.3■■□□□ 1.96
C2orf40-201ENST00000238044 RIMBP3Q9UFD9 1639 aa27.3■■□□□ 1.96
C2orf40-201ENST00000238044 ERICH3Q5RHP9 1530 aa27.3■■□□□ 1.96
C2orf40-201ENST00000238044 ARHGEF11O15085 1522 aa27.25■■□□□ 1.95
C2orf40-201ENST00000238044 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
C2orf40-201ENST00000238044 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
C2orf40-201ENST00000238044 GRIN2AQ12879 1464 aa27.23■■□□□ 1.95
C2orf40-201ENST00000238044 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
C2orf40-201ENST00000238044 CEP170Q5SW79 1584 aa27.12■■□□□ 1.93
C2orf40-201ENST00000238044 IGF1RP08069 1367 aa27.09■■□□□ 1.93
C2orf40-201ENST00000238044 CUL7Q14999 1698 aa27.09■■□□□ 1.93
C2orf40-201ENST00000238044 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
C2orf40-201ENST00000238044 NUP160Q12769 1436 aa27.06■■□□□ 1.92
C2orf40-201ENST00000238044 ARAP1Q96P48 1450 aa27.01■■□□□ 1.91
C2orf40-201ENST00000238044 RUSC2Q8N2Y8 1516 aa26.99■■□□□ 1.91
C2orf40-201ENST00000238044 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
C2orf40-201ENST00000238044 ERCC6L2Q5T890 1561 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms