Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HMGN2P05204 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGN2P05204 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HMGN2P05204 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HMGN2P05204 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HMGN2P05204 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGN2P05204 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
HMGN2P05204 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGN2P05204 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGN2P05204 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.46□□□□□ -0.09
HMGN2P05204 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
HMGN2P05204 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
HMGN2P05204 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.46□□□□□ -0.09
HMGN2P05204 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGN2P05204 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGN2P05204 AC106028.4-201ENST00000614509 607 ntBASIC14.46□□□□□ -0.09
HMGN2P05204 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGN2P05204 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGN2P05204 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGN2P05204 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGN2P05204 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HMGN2P05204 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGN2P05204 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGN2P05204 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
HMGN2P05204 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HMGN2P05204 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGN2P05204 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGN2P05204 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGN2P05204 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.46□□□□□ -0.1
HMGN2P05204 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.46□□□□□ -0.1
HMGN2P05204 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.46□□□□□ -0.1
HMGN2P05204 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HMGN2P05204 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGN2P05204 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGN2P05204 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HMGN2P05204 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGN2P05204 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGN2P05204 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HMGN2P05204 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.45□□□□□ -0.1
HMGN2P05204 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMGN2P05204 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMGN2P05204 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
HMGN2P05204 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.45□□□□□ -0.1
HMGN2P05204 AC004890.2-204ENST00000481968 304 ntBASIC14.45□□□□□ -0.1
HMGN2P05204 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGN2P05204 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGN2P05204 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.45□□□□□ -0.1
HMGN2P05204 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGN2P05204 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HMGN2P05204 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.45□□□□□ -0.1
HMGN2P05204 AC000095.1-201ENST00000603208 874 ntBASIC14.45□□□□□ -0.1
HMGN2P05204 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMGN2P05204 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGN2P05204 AL645728.2-202ENST00000641679 227 ntBASIC14.45□□□□□ -0.1
HMGN2P05204 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HMGN2P05204 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 AP000845.1-201ENST00000581677 2131 ntBASIC14.45□□□□□ -0.1
HMGN2P05204 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGN2P05204 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HMGN2P05204 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HMGN2P05204 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGN2P05204 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HMGN2P05204 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGN2P05204 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGN2P05204 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGN2P05204 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms