RNA–Protein interactions for RNA: ENST00000573493.1

AC040162.1-202, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AC040162.1, Length 573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040162.1-202ENST00000573493 NISCHQ9Y2I1 1504 aa39.25■■■■□ 3.87
AC040162.1-202ENST00000573493 CCDC180Q9P1Z9 1646 aa34.98■■■■□ 3.19
AC040162.1-202ENST00000573493 ABCC9O60706 1549 aa34.47■■■■□ 3.11
AC040162.1-202ENST00000573493 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
AC040162.1-202ENST00000573493 NACADO15069 1562 aa32.91■■■□□ 2.86
AC040162.1-202ENST00000573493 DCAF8L2P0C7V8 631 aa32.81■■■□□ 2.84
AC040162.1-202ENST00000573493 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
AC040162.1-202ENST00000573493 MYO15BQ96JP2 1530 aa32.64■■■□□ 2.82
AC040162.1-202ENST00000573493 DCAF1Q9Y4B6 1507 aa32.42■■■□□ 2.78
AC040162.1-202ENST00000573493 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
AC040162.1-202ENST00000573493 PABPN1Q86U42 306 aaKnown RBP eCLIP32.16■■■□□ 2.74
AC040162.1-202ENST00000573493 BICRAQ9NZM4 1560 aa32.11■■■□□ 2.73
AC040162.1-202ENST00000573493 SCRIBQ14160 1630 aa31.95■■■□□ 2.71
AC040162.1-202ENST00000573493 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.7
AC040162.1-202ENST00000573493 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
AC040162.1-202ENST00000573493 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
AC040162.1-202ENST00000573493 CC2D2AQ9P2K1 1620 aa31.17■■■□□ 2.58
AC040162.1-202ENST00000573493 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.55
AC040162.1-202ENST00000573493 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
AC040162.1-202ENST00000573493 BAZ1AQ9NRL2 1556 aaPredicted RBP30.4■■■□□ 2.46
AC040162.1-202ENST00000573493 ATAD2BQ9ULI0 1458 aa30.39■■■□□ 2.46
AC040162.1-202ENST00000573493 NCAPD3P42695 1498 aa30.38■■■□□ 2.45
AC040162.1-202ENST00000573493 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
AC040162.1-202ENST00000573493 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
AC040162.1-202ENST00000573493 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
AC040162.1-202ENST00000573493 PEG3Q9GZU2 1588 aa30.2■■■□□ 2.43
AC040162.1-202ENST00000573493 BAZ1BQ9UIG0 1483 aaKnown RBP30.11■■■□□ 2.41
AC040162.1-202ENST00000573493 WIZO95785 1651 aa29.96■■■□□ 2.39
AC040162.1-202ENST00000573493 RSF1Q96T23 1441 aaPredicted RBP29.83■■■□□ 2.37
AC040162.1-202ENST00000573493 NESP48681 1621 aa29.8■■■□□ 2.36
AC040162.1-202ENST00000573493 ERCC6Q03468 1493 aa29.66■■■□□ 2.34
AC040162.1-202ENST00000573493 LAMC3Q9Y6N6 1575 aa29.6■■■□□ 2.33
AC040162.1-202ENST00000573493 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
AC040162.1-202ENST00000573493 CUX2O14529 1486 aa29.48■■■□□ 2.31
AC040162.1-202ENST00000573493 CADPSQ9ULU8 1353 aa29.47■■■□□ 2.31
AC040162.1-202ENST00000573493 KIF21AQ7Z4S6 1674 aa29.44■■■□□ 2.3
AC040162.1-202ENST00000573493 THOC2Q8NI27 1593 aaKnown RBP29.39■■■□□ 2.3
AC040162.1-202ENST00000573493 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
AC040162.1-202ENST00000573493 CFTRP13569 1480 aa29.28■■■□□ 2.28
AC040162.1-202ENST00000573493 CCDC88BA6NC98 1476 aa29.24■■■□□ 2.27
AC040162.1-202ENST00000573493 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
AC040162.1-202ENST00000573493 MRC2Q9UBG0 1479 aa29.14■■■□□ 2.26
AC040162.1-202ENST00000573493 CEP164Q9UPV0 1460 aa29.13■■■□□ 2.25
AC040162.1-202ENST00000573493 WDR62O43379 1518 aa29.07■■■□□ 2.24
AC040162.1-202ENST00000573493 PRDM2Q13029 1718 aa29.06■■■□□ 2.24
AC040162.1-202ENST00000573493 URB2Q14146 1524 aaKnown RBP28.93■■■□□ 2.22
AC040162.1-202ENST00000573493 DNAJC5Q9H3Z4 198 aa28.89■■■□□ 2.22
AC040162.1-202ENST00000573493 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
AC040162.1-202ENST00000573493 TOPBP1Q92547 1522 aa28.69■■■□□ 2.18
AC040162.1-202ENST00000573493 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
AC040162.1-202ENST00000573493 ABCC8Q09428 1581 aa28.57■■■□□ 2.16
AC040162.1-202ENST00000573493 IFT140Q96RY7 1462 aa28.51■■■□□ 2.15
AC040162.1-202ENST00000573493 ZNF608Q9ULD9 1512 aaPredicted RBP28.48■■■□□ 2.15
AC040162.1-202ENST00000573493 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
AC040162.1-202ENST00000573493 CUX1P39880 1505 aa28.43■■■□□ 2.14
AC040162.1-202ENST00000573493 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
AC040162.1-202ENST00000573493 EIF4G3O43432 1585 aaKnown RBP28.35■■■□□ 2.13
AC040162.1-202ENST00000573493 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
AC040162.1-202ENST00000573493 RAD54L2Q9Y4B4 1467 aa28.34■■■□□ 2.13
AC040162.1-202ENST00000573493 AQRO60306 1485 aaKnown RBP eCLIP28.27■■■□□ 2.12
AC040162.1-202ENST00000573493 SOGA1O94964 1423 aa28.26■■■□□ 2.12
AC040162.1-202ENST00000573493 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
AC040162.1-202ENST00000573493 WDR97A6NE52 1622 aa28.16■■■□□ 2.1
AC040162.1-202ENST00000573493 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
AC040162.1-202ENST00000573493 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
AC040162.1-202ENST00000573493 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
AC040162.1-202ENST00000573493 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.09
AC040162.1-202ENST00000573493 TOP2BQ02880 1626 aa28.09■■■□□ 2.09
AC040162.1-202ENST00000573493 CHD1O14646 1710 aa28.05■■■□□ 2.08
AC040162.1-202ENST00000573493 ABCA10Q8WWZ4 1543 aa28.02■■■□□ 2.08
AC040162.1-202ENST00000573493 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
AC040162.1-202ENST00000573493 ABCA5Q8WWZ7 1642 aa27.98■■■□□ 2.07
AC040162.1-202ENST00000573493 GRIN2BQ13224 1484 aa27.96■■■□□ 2.07
AC040162.1-202ENST00000573493 PBRM1Q86U86 1689 aa27.96■■■□□ 2.07
AC040162.1-202ENST00000573493 GAPVD1Q14C86 1478 aa27.95■■■□□ 2.06
AC040162.1-202ENST00000573493 MAGI1Q96QZ7 1491 aaPredicted RBP27.91■■■□□ 2.06
AC040162.1-202ENST00000573493 FBLN2P98095 1184 aa27.9■■■□□ 2.06
AC040162.1-202ENST00000573493 SYNJ2O15056 1496 aa27.82■■■□□ 2.04
AC040162.1-202ENST00000573493 RIMBP3CA6NJZ7 1639 aa27.81■■■□□ 2.04
AC040162.1-202ENST00000573493 RIMBP3BA6NNM3 1639 aa27.81■■■□□ 2.04
AC040162.1-202ENST00000573493 RIMBP3Q9UFD9 1639 aa27.81■■■□□ 2.04
AC040162.1-202ENST00000573493 CHMP7Q8WUX9 453 aaPredicted RBP27.77■■■□□ 2.04
AC040162.1-202ENST00000573493 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
AC040162.1-202ENST00000573493 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
AC040162.1-202ENST00000573493 CLASP1Q7Z460 1538 aa27.73■■■□□ 2.03
AC040162.1-202ENST00000573493 ADAMTS12P58397 1594 aa27.72■■■□□ 2.03
AC040162.1-202ENST00000573493 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
AC040162.1-202ENST00000573493 GRIN2AQ12879 1464 aa27.64■■■□□ 2.01
AC040162.1-202ENST00000573493 FHAD1B1AJZ9 1412 aa27.6■■■□□ 2.01
AC040162.1-202ENST00000573493 ARAP1Q96P48 1450 aa27.55■■■□□ 2
AC040162.1-202ENST00000573493 CEP170Q5SW79 1584 aa27.55■■■□□ 2
AC040162.1-202ENST00000573493 NUP160Q12769 1436 aa27.52■■■□□ 2
AC040162.1-202ENST00000573493 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
AC040162.1-202ENST00000573493 CYB5RLQ6IPT4 315 aa27.47■■□□□ 1.99
AC040162.1-202ENST00000573493 IGF1RP08069 1367 aa27.46■■□□□ 1.99
AC040162.1-202ENST00000573493 ERCC6L2Q5T890 1561 aa27.39■■□□□ 1.97
AC040162.1-202ENST00000573493 CUL7Q14999 1698 aa27.38■■□□□ 1.97
AC040162.1-202ENST00000573493 SHROOM2Q13796 1616 aa27.36■■□□□ 1.97
AC040162.1-202ENST00000573493 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
AC040162.1-202ENST00000573493 CARMIL1Q5VZK9 1371 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms