RNA–Protein interactions for RNA: ENST00000299179.9

MRPL43-201, Transcript of mitochondrial ribosomal protein L43, humanhuman

TSL 1 (best) BASIC

Gene MRPL43, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-201ENST00000299179 NISCHQ9Y2I1 1504 aa40.06■■■■■ 4
MRPL43-201ENST00000299179 CCDC180Q9P1Z9 1646 aa35.93■■■■□ 3.34
MRPL43-201ENST00000299179 ABCC9O60706 1549 aa35.9■■■■□ 3.34
MRPL43-201ENST00000299179 RB1CC1Q8TDY2 1594 aa34.21■■■■□ 3.07
MRPL43-201ENST00000299179 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
MRPL43-201ENST00000299179 NACADO15069 1562 aa33.97■■■■□ 3.03
MRPL43-201ENST00000299179 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
MRPL43-201ENST00000299179 DNAJC5BQ9UF47 199 aa33.46■■■□□ 2.95
MRPL43-201ENST00000299179 PABPN1Q86U42 306 aaKnown RBP eCLIP33.45■■■□□ 2.95
MRPL43-201ENST00000299179 UNC13AQ9UPW8 1703 aa33.32■■■□□ 2.92
MRPL43-201ENST00000299179 ZCCHC6Q5VYS8 1495 aaKnown RBP33.22■■■□□ 2.91
MRPL43-201ENST00000299179 BICRAQ9NZM4 1560 aa33.08■■■□□ 2.89
MRPL43-201ENST00000299179 DCAF1Q9Y4B6 1507 aa33.07■■■□□ 2.89
MRPL43-201ENST00000299179 SCRIBQ14160 1630 aa32.8■■■□□ 2.84
MRPL43-201ENST00000299179 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
MRPL43-201ENST00000299179 CC2D2AQ9P2K1 1620 aa32.4■■■□□ 2.78
MRPL43-201ENST00000299179 EIF4G1Q04637 1599 aaKnown RBP32.35■■■□□ 2.77
MRPL43-201ENST00000299179 CECR2Q9BXF3 1484 aa32.34■■■□□ 2.77
MRPL43-201ENST00000299179 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
MRPL43-201ENST00000299179 SMARCA4P51532 1647 aa31.25■■■□□ 2.59
MRPL43-201ENST00000299179 ATAD2BQ9ULI0 1458 aa31.25■■■□□ 2.59
MRPL43-201ENST00000299179 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
MRPL43-201ENST00000299179 BAZ1AQ9NRL2 1556 aaPredicted RBP31.15■■■□□ 2.58
MRPL43-201ENST00000299179 HMGXB3Q12766 1538 aa31.13■■■□□ 2.57
MRPL43-201ENST00000299179 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
MRPL43-201ENST00000299179 BAZ1BQ9UIG0 1483 aaKnown RBP31.04■■■□□ 2.56
MRPL43-201ENST00000299179 CUX2O14529 1486 aa30.9■■■□□ 2.54
MRPL43-201ENST00000299179 PEG3Q9GZU2 1588 aa30.89■■■□□ 2.54
MRPL43-201ENST00000299179 MROH2BQ7Z745 1585 aa30.86■■■□□ 2.53
MRPL43-201ENST00000299179 NESP48681 1621 aa30.81■■■□□ 2.52
MRPL43-201ENST00000299179 DNAJC5Q9H3Z4 198 aa30.75■■■□□ 2.51
MRPL43-201ENST00000299179 LAMC3Q9Y6N6 1575 aa30.65■■■□□ 2.5
MRPL43-201ENST00000299179 PDS5BQ9NTI5 1447 aa30.53■■■□□ 2.48
MRPL43-201ENST00000299179 WIZO95785 1651 aa30.51■■■□□ 2.47
MRPL43-201ENST00000299179 THOC2Q8NI27 1593 aaKnown RBP30.47■■■□□ 2.47
MRPL43-201ENST00000299179 KIF21AQ7Z4S6 1674 aa30.42■■■□□ 2.46
MRPL43-201ENST00000299179 CADPSQ9ULU8 1353 aa30.42■■■□□ 2.46
MRPL43-201ENST00000299179 RSF1Q96T23 1441 aaPredicted RBP30.26■■■□□ 2.43
MRPL43-201ENST00000299179 MRC2Q9UBG0 1479 aa30.22■■■□□ 2.43
MRPL43-201ENST00000299179 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
MRPL43-201ENST00000299179 CEP164Q9UPV0 1460 aa30.15■■■□□ 2.42
MRPL43-201ENST00000299179 WDR62O43379 1518 aa30.1■■■□□ 2.41
MRPL43-201ENST00000299179 FANCD2Q9BXW9 1451 aa30.09■■■□□ 2.41
MRPL43-201ENST00000299179 CFTRP13569 1480 aa30.06■■■□□ 2.4
MRPL43-201ENST00000299179 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
MRPL43-201ENST00000299179 URB2Q14146 1524 aaKnown RBP29.78■■■□□ 2.36
MRPL43-201ENST00000299179 PRDM2Q13029 1718 aa29.77■■■□□ 2.36
MRPL43-201ENST00000299179 TRIM41Q8WV44 630 aa29.59■■■□□ 2.33
MRPL43-201ENST00000299179 OSCARQ8IYS5 282 aa29.56■■■□□ 2.32
MRPL43-201ENST00000299179 IFT140Q96RY7 1462 aa29.52■■■□□ 2.32
MRPL43-201ENST00000299179 TOPBP1Q92547 1522 aa29.5■■■□□ 2.31
MRPL43-201ENST00000299179 ABCC8Q09428 1581 aa29.5■■■□□ 2.31
MRPL43-201ENST00000299179 DNMBPQ6XZF7 1577 aa29.42■■■□□ 2.3
MRPL43-201ENST00000299179 ZNF608Q9ULD9 1512 aaPredicted RBP29.41■■■□□ 2.3
MRPL43-201ENST00000299179 EIF4G3O43432 1585 aaKnown RBP29.29■■■□□ 2.28
MRPL43-201ENST00000299179 POLA1P09884 1462 aaPredicted RBP29.21■■■□□ 2.27
MRPL43-201ENST00000299179 AQRO60306 1485 aaKnown RBP eCLIP29.18■■■□□ 2.265e-8■■■■□ 19.3
MRPL43-201ENST00000299179 TARBP1Q13395 1621 aaKnown RBP29.18■■■□□ 2.26
MRPL43-201ENST00000299179 SUPT5HO00267 1087 aaKnown RBP29.15■■■□□ 2.26
MRPL43-201ENST00000299179 FBLN2P98095 1184 aa29.12■■■□□ 2.25
MRPL43-201ENST00000299179 SOGA1O94964 1423 aa29.11■■■□□ 2.25
MRPL43-201ENST00000299179 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
MRPL43-201ENST00000299179 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
MRPL43-201ENST00000299179 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
MRPL43-201ENST00000299179 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
MRPL43-201ENST00000299179 FGD5Q6ZNL6 1462 aa29.06■■■□□ 2.24
MRPL43-201ENST00000299179 TDRD9Q8NDG6 1382 aaKnown RBP29.04■■■□□ 2.24
MRPL43-201ENST00000299179 CHD1O14646 1710 aa29.04■■■□□ 2.24
MRPL43-201ENST00000299179 ARHGEF11O15085 1522 aa29.02■■■□□ 2.24
MRPL43-201ENST00000299179 CUX1P39880 1505 aa29■■■□□ 2.23
MRPL43-201ENST00000299179 WDR97A6NE52 1622 aa28.96■■■□□ 2.23
MRPL43-201ENST00000299179 SNAPC4Q5SXM2 1469 aa28.92■■■□□ 2.22
MRPL43-201ENST00000299179 CHMP7Q8WUX9 453 aaPredicted RBP28.89■■■□□ 2.22
MRPL43-201ENST00000299179 CYB5RLQ6IPT4 315 aa28.87■■■□□ 2.21
MRPL43-201ENST00000299179 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
MRPL43-201ENST00000299179 MAGI1Q96QZ7 1491 aaPredicted RBP28.85■■■□□ 2.21
MRPL43-201ENST00000299179 SYNJ1O43426 1573 aa28.77■■■□□ 2.2
MRPL43-201ENST00000299179 GAPVD1Q14C86 1478 aa28.77■■■□□ 2.2
MRPL43-201ENST00000299179 SYNJ2O15056 1496 aa28.74■■■□□ 2.19
MRPL43-201ENST00000299179 PBRM1Q86U86 1689 aa28.72■■■□□ 2.19
MRPL43-201ENST00000299179 ARAP1Q96P48 1450 aa28.72■■■□□ 2.19
MRPL43-201ENST00000299179 ABCA10Q8WWZ4 1543 aa28.71■■■□□ 2.19
MRPL43-201ENST00000299179 WRNQ14191 1432 aaPredicted RBP eCLIP28.68■■■□□ 2.18
MRPL43-201ENST00000299179 CLASP1Q7Z460 1538 aa28.67■■■□□ 2.18
MRPL43-201ENST00000299179 ABCA5Q8WWZ7 1642 aa28.64■■■□□ 2.18
MRPL43-201ENST00000299179 TRHP20396 242 aaPredicted RBP28.61■■■□□ 2.17
MRPL43-201ENST00000299179 TOP2BQ02880 1626 aa28.58■■■□□ 2.17
MRPL43-201ENST00000299179 BIVM-ERCC5R4GMW8 1640 aa28.57■■■□□ 2.16
MRPL43-201ENST00000299179 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
MRPL43-201ENST00000299179 ADAMTS12P58397 1594 aa28.45■■■□□ 2.15
MRPL43-201ENST00000299179 FHAD1B1AJZ9 1412 aa28.41■■■□□ 2.14
MRPL43-201ENST00000299179 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
MRPL43-201ENST00000299179 NUP160Q12769 1436 aa28.33■■■□□ 2.13
MRPL43-201ENST00000299179 CEP170Q5SW79 1584 aa28.32■■■□□ 2.12
MRPL43-201ENST00000299179 ERCC6L2Q5T890 1561 aa28.22■■■□□ 2.11
MRPL43-201ENST00000299179 SHROOM2Q13796 1616 aa28.16■■■□□ 2.1
MRPL43-201ENST00000299179 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
MRPL43-201ENST00000299179 PRG4Q92954 1404 aaPredicted RBP28.11■■■□□ 2.09
MRPL43-201ENST00000299179 JPH4Q96JJ6 628 aa28.1■■■□□ 2.09
MRPL43-201ENST00000299179 RUSC2Q8N2Y8 1516 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms