RNA–Protein interactions for RNA: ENST00000264235.12

GSK3B-201, Transcript of glycogen synthase kinase 3 beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GSK3B, Length 7,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3B-201ENST00000264235 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
GSK3B-201ENST00000264235 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
GSK3B-201ENST00000264235 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
GSK3B-201ENST00000264235 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
GSK3B-201ENST00000264235 PELP1Q8IZL8 1130 aaKnown RBP24.76■■□□□ 1.55
GSK3B-201ENST00000264235 APLP2Q06481 763 aa24.74■■□□□ 1.55
GSK3B-201ENST00000264235 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
GSK3B-201ENST00000264235 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
GSK3B-201ENST00000264235 RANGAP1P46060 587 aaPredicted RBP24.03■■□□□ 1.44
GSK3B-201ENST00000264235 TTBK1Q5TCY1 1321 aaPredicted RBP24.03■■□□□ 1.44
GSK3B-201ENST00000264235 ERICH6Q7L0X2 663 aa23.88■■□□□ 1.41
GSK3B-201ENST00000264235 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
GSK3B-201ENST00000264235 CCER1Q8TC90 406 aaPredicted RBP23.73■■□□□ 1.39
GSK3B-201ENST00000264235 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
GSK3B-201ENST00000264235 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
GSK3B-201ENST00000264235 PCGF6Q9BYE7 350 aa23.39■■□□□ 1.34
GSK3B-201ENST00000264235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.32
GSK3B-201ENST00000264235 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.32
GSK3B-201ENST00000264235 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
GSK3B-201ENST00000264235 NEFLP07196 543 aa23.2■■□□□ 1.3
GSK3B-201ENST00000264235 SLC4A1APQ9BWU0 796 aaKnown RBP23.19■■□□□ 1.3
GSK3B-201ENST00000264235 POLR3GLQ9BT43 218 aa23.13■■□□□ 1.29
GSK3B-201ENST00000264235 CENPBP07199 599 aaPredicted RBP23.06■■□□□ 1.28
GSK3B-201ENST00000264235 DAXXQ9UER7 740 aaPredicted RBP23.06■■□□□ 1.28
GSK3B-201ENST00000264235 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
GSK3B-201ENST00000264235 CNGB1Q14028 1251 aaPredicted RBP22.81■■□□□ 1.24
GSK3B-201ENST00000264235 ITGAEP38570 1179 aa22.73■■□□□ 1.23
GSK3B-201ENST00000264235 YTHDC1Q96MU7 727 aaKnown RBP22.72■■□□□ 1.23
GSK3B-201ENST00000264235 MYT1Q01538 1121 aa22.7■■□□□ 1.22
GSK3B-201ENST00000264235 ZEB1P37275 1124 aaPredicted RBP22.67■■□□□ 1.22
GSK3B-201ENST00000264235 SLC24A1O60721 1099 aa22.63■■□□□ 1.21
GSK3B-201ENST00000264235 BCANQ96GW7 911 aa22.56■■□□□ 1.2
GSK3B-201ENST00000264235 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
GSK3B-201ENST00000264235 PPARGC1BQ86YN6 1023 aaKnown RBP22.48■■□□□ 1.19
GSK3B-201ENST00000264235 ZBTB47Q9UFB7 747 aaPredicted RBP22.37■■□□□ 1.17
GSK3B-201ENST00000264235 ZNF316A6NFI3 1004 aaPredicted RBP22.36■■□□□ 1.17
GSK3B-201ENST00000264235 FBLN2P98095 1184 aa22.26■■□□□ 1.15
GSK3B-201ENST00000264235 BCL11AQ9H165 835 aa22.22■■□□□ 1.15
GSK3B-201ENST00000264235 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
GSK3B-201ENST00000264235 ESF1Q9H501 851 aaKnown RBP22.18■■□□□ 1.14
GSK3B-201ENST00000264235 TRIM52Q96A61 297 aa22.12■■□□□ 1.13
GSK3B-201ENST00000264235 NEFMP07197 916 aa22.11■■□□□ 1.13
GSK3B-201ENST00000264235 FAM50AQ14320 339 aaKnown RBP22.05■■□□□ 1.12
GSK3B-201ENST00000264235 ZNF326Q5BKZ1 582 aaKnown RBP21.95■■□□□ 1.1
GSK3B-201ENST00000264235 RTL5Q5HYW3 569 aaPredicted RBP21.92■■□□□ 1.1
GSK3B-201ENST00000264235 CANXP27824 592 aaKnown RBP21.9■■□□□ 1.1
GSK3B-201ENST00000264235 STAG3Q9UJ98 1225 aa21.89■■□□□ 1.1
GSK3B-201ENST00000264235 A0A0G2JS52 829 aa21.84■■□□□ 1.09
GSK3B-201ENST00000264235 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
GSK3B-201ENST00000264235 NEUROD1Q13562 356 aa21.74■■□□□ 1.07
GSK3B-201ENST00000264235 NPM1P06748 294 aaKnown RBP eCLIP21.7■■□□□ 1.06
GSK3B-201ENST00000264235 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
GSK3B-201ENST00000264235 TRIM26Q12899 539 aaPredicted RBP21.66■■□□□ 1.06
GSK3B-201ENST00000264235 CHGAP10645 457 aaKnown RBP21.64■■□□□ 1.05
GSK3B-201ENST00000264235 ARID3CA6NKF2 412 aa21.61■■□□□ 1.05
GSK3B-201ENST00000264235 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
GSK3B-201ENST00000264235 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
GSK3B-201ENST00000264235 CDK11BP21127 795 aaKnown RBP21.47■■□□□ 1.03
GSK3B-201ENST00000264235 CDK11AQ9UQ88 783 aaPredicted RBP21.47■■□□□ 1.03
GSK3B-201ENST00000264235 PLEKHG5O94827 1062 aa21.45■■□□□ 1.02
GSK3B-201ENST00000264235 ABCC9O60706 1549 aa21.42■■□□□ 1.02
GSK3B-201ENST00000264235 ANP32CO43423 234 aa21.42■■□□□ 1.02
GSK3B-201ENST00000264235 HAP1P54257 671 aaPredicted RBP21.39■■□□□ 1.01
GSK3B-201ENST00000264235 ZBTB7CA1YPR0 619 aa21.39■■□□□ 1.01
GSK3B-201ENST00000264235 C14orf37Q86TY3 774 aa21.38■■□□□ 1.01
GSK3B-201ENST00000264235 HSP90AA1P07900 732 aaKnown RBP21.36■■□□□ 1.01
GSK3B-201ENST00000264235 P3H3Q8IVL6 736 aa21.33■■□□□ 1.01
GSK3B-201ENST00000264235 LOC105371045A0A1W2PR82 267 aa21.3■■□□□ 1
GSK3B-201ENST00000264235 HRCP23327 699 aa21.29■■□□□ 1
GSK3B-201ENST00000264235 ANP32BQ92688 251 aaKnown RBP21.27■■□□□ 1
GSK3B-201ENST00000264235 ARXQ96QS3 562 aa21.2■□□□□ 0.98
GSK3B-201ENST00000264235 TULP1O00294 542 aaPredicted RBP21.2■□□□□ 0.98
GSK3B-201ENST00000264235 NPHP1O15259 732 aa21.18■□□□□ 0.98
GSK3B-201ENST00000264235 ARID4BQ4LE39 1312 aaPredicted RBP21.15■□□□□ 0.98
GSK3B-201ENST00000264235 DIEXFQ68CQ4 756 aaKnown RBP21.15■□□□□ 0.98
GSK3B-201ENST00000264235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.14■□□□□ 0.971e-6■■■□□ 16.6
GSK3B-201ENST00000264235 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
GSK3B-201ENST00000264235 PPP1R15AO75807 674 aaPredicted RBP21.09■□□□□ 0.97
GSK3B-201ENST00000264235 UPF2Q9HAU5 1272 aaKnown RBP21.09■□□□□ 0.97
GSK3B-201ENST00000264235 ANP32AP39687 249 aaKnown RBP21■□□□□ 0.95
GSK3B-201ENST00000264235 NCBP3Q53F19 620 aaKnown RBP20.97■□□□□ 0.95
GSK3B-201ENST00000264235 TRHP20396 242 aaPredicted RBP20.94■□□□□ 0.94
GSK3B-201ENST00000264235 MYH16Q9H6N6 1097 aa20.93■□□□□ 0.94
GSK3B-201ENST00000264235 SALL2Q9Y467 1007 aaPredicted RBP20.9■□□□□ 0.94
GSK3B-201ENST00000264235 LMOD2Q6P5Q4 547 aa20.9■□□□□ 0.94
GSK3B-201ENST00000264235 WDR43Q15061 677 aaKnown RBP eCLIP20.85■□□□□ 0.93
GSK3B-201ENST00000264235 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.83■□□□□ 0.93
GSK3B-201ENST00000264235 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.92
GSK3B-201ENST00000264235 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
GSK3B-201ENST00000264235 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
GSK3B-201ENST00000264235 KDM2AQ9Y2K7 1162 aa20.78■□□□□ 0.92
GSK3B-201ENST00000264235 KCNH8Q96L42 1107 aa20.75■□□□□ 0.91
GSK3B-201ENST00000264235 TONSLQ96HA7 1378 aa20.72■□□□□ 0.91
GSK3B-201ENST00000264235 GOLGA2Q08379 1002 aa20.72■□□□□ 0.91
GSK3B-201ENST00000264235 TMC1Q8TDI8 760 aa20.7■□□□□ 0.9
GSK3B-201ENST00000264235 CLSTN1O94985 981 aa20.69■□□□□ 0.9
GSK3B-201ENST00000264235 ZRSR1Q15695 479 aaKnown RBP20.69■□□□□ 0.9
GSK3B-201ENST00000264235 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
GSK3B-201ENST00000264235 CHIC2Q9UKJ5 165 aa20.67■□□□□ 0.9
GSK3B-201ENST00000264235 TAOK2Q9UL54 1235 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 527.7 ms