RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
RIPK1-201ENST00000259808 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
RIPK1-201ENST00000259808 SUPT5HO00267 1087 aaKnown RBP26.17■■□□□ 1.78
RIPK1-201ENST00000259808 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
RIPK1-201ENST00000259808 EHMT2Q96KQ7 1210 aa25.35■■□□□ 1.65
RIPK1-201ENST00000259808 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
RIPK1-201ENST00000259808 FAM9AQ8IZU1 332 aaPredicted RBP24.67■■□□□ 1.54
RIPK1-201ENST00000259808 TTBK1Q5TCY1 1321 aaPredicted RBP24.44■■□□□ 1.5
RIPK1-201ENST00000259808 PPARGC1BQ86YN6 1023 aaKnown RBP24.01■■□□□ 1.43
RIPK1-201ENST00000259808 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
RIPK1-201ENST00000259808 RANGAP1P46060 587 aaPredicted RBP23.89■■□□□ 1.42
RIPK1-201ENST00000259808 TRIM41Q8WV44 630 aa23.89■■□□□ 1.42
RIPK1-201ENST00000259808 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
RIPK1-201ENST00000259808 HRCP23327 699 aa23.6■■□□□ 1.37
RIPK1-201ENST00000259808 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
RIPK1-201ENST00000259808 APLP2Q06481 763 aa23.52■■□□□ 1.36
RIPK1-201ENST00000259808 UBTFP17480 764 aaKnown RBP23.39■■□□□ 1.34
RIPK1-201ENST00000259808 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
RIPK1-201ENST00000259808 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.33
RIPK1-201ENST00000259808 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
RIPK1-201ENST00000259808 ABCC9O60706 1549 aa23.18■■□□□ 1.3
RIPK1-201ENST00000259808 ATP1B4Q9UN42 357 aaPredicted RBP23.13■■□□□ 1.29
RIPK1-201ENST00000259808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.07■■□□□ 1.28
RIPK1-201ENST00000259808 CENPBP07199 599 aaPredicted RBP23.06■■□□□ 1.28
RIPK1-201ENST00000259808 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
RIPK1-201ENST00000259808 HNRNPUL2Q1KMD3 747 aaKnown RBP22.94■■□□□ 1.26
RIPK1-201ENST00000259808 ITGAEP38570 1179 aa22.89■■□□□ 1.25
RIPK1-201ENST00000259808 PELP1Q8IZL8 1130 aaKnown RBP22.82■■□□□ 1.24
RIPK1-201ENST00000259808 DIEXFQ68CQ4 756 aaKnown RBP22.56■■□□□ 1.2
RIPK1-201ENST00000259808 ZCCHC6Q5VYS8 1495 aaKnown RBP22.51■■□□□ 1.19
RIPK1-201ENST00000259808 CNGB1Q14028 1251 aaPredicted RBP22.47■■□□□ 1.19
RIPK1-201ENST00000259808 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
RIPK1-201ENST00000259808 GTF3C3Q9Y5Q9 886 aa22.35■■□□□ 1.17
RIPK1-201ENST00000259808 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
RIPK1-201ENST00000259808 NEFLP07196 543 aa22.24■■□□□ 1.15
RIPK1-201ENST00000259808 POLR3GLQ9BT43 218 aa22.23■■□□□ 1.15
RIPK1-201ENST00000259808 ERICH6Q7L0X2 663 aa22.21■■□□□ 1.15
RIPK1-201ENST00000259808 BCANQ96GW7 911 aa22.12■■□□□ 1.13
RIPK1-201ENST00000259808 NEUROD1Q13562 356 aa22.12■■□□□ 1.13
RIPK1-201ENST00000259808 FAM50AQ14320 339 aaKnown RBP22.08■■□□□ 1.13
RIPK1-201ENST00000259808 CSRNP3Q8WYN3 585 aa22.02■■□□□ 1.11
RIPK1-201ENST00000259808 ACIN1Q9UKV3 1341 aaKnown RBP22■■□□□ 1.11
RIPK1-201ENST00000259808 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
RIPK1-201ENST00000259808 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
RIPK1-201ENST00000259808 P3H3Q8IVL6 736 aa21.98■■□□□ 1.11
RIPK1-201ENST00000259808 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
RIPK1-201ENST00000259808 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
RIPK1-201ENST00000259808 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
RIPK1-201ENST00000259808 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
RIPK1-201ENST00000259808 TRIM52Q96A61 297 aa21.74■■□□□ 1.07
RIPK1-201ENST00000259808 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
RIPK1-201ENST00000259808 MIER1Q8N108 512 aa21.66■■□□□ 1.06
RIPK1-201ENST00000259808 ZNF326Q5BKZ1 582 aaKnown RBP21.66■■□□□ 1.06
RIPK1-201ENST00000259808 HIRIP3Q9BW71 556 aaPredicted RBP21.63■■□□□ 1.05
RIPK1-201ENST00000259808 MYT1LQ9UL68 1186 aa21.61■■□□□ 1.05
RIPK1-201ENST00000259808 MYT1Q01538 1121 aa21.55■■□□□ 1.04
RIPK1-201ENST00000259808 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
RIPK1-201ENST00000259808 FBLN2P98095 1184 aa21.52■■□□□ 1.04
RIPK1-201ENST00000259808 ANP32CO43423 234 aa21.49■■□□□ 1.03
RIPK1-201ENST00000259808 FKBP8Q14318 412 aa21.41■■□□□ 1.02
RIPK1-201ENST00000259808 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
RIPK1-201ENST00000259808 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1.01
RIPK1-201ENST00000259808 CHIC2Q9UKJ5 165 aa21.33■■□□□ 1.01
RIPK1-201ENST00000259808 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
RIPK1-201ENST00000259808 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
RIPK1-201ENST00000259808 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
RIPK1-201ENST00000259808 IRX6P78412 446 aaPredicted RBP21.29■■□□□ 1
RIPK1-201ENST00000259808 ZNF777Q9ULD5 760 aaPredicted RBP21.29■■□□□ 1
RIPK1-201ENST00000259808 CLIP1P30622 1438 aa21.27■□□□□ 0.99
RIPK1-201ENST00000259808 NACADO15069 1562 aa21.25■□□□□ 0.99
RIPK1-201ENST00000259808 HNRNPUQ00839 825 aaKnown RBP eCLIP21.23■□□□□ 0.99
RIPK1-201ENST00000259808 DAXXQ9UER7 740 aaPredicted RBP21.22■□□□□ 0.99
RIPK1-201ENST00000259808 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
RIPK1-201ENST00000259808 SALL2Q9Y467 1007 aaPredicted RBP21.2■□□□□ 0.98
RIPK1-201ENST00000259808 SOGA1O94964 1423 aa21.19■□□□□ 0.98
RIPK1-201ENST00000259808 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
RIPK1-201ENST00000259808 CLSPNQ9HAW4 1339 aa21.12■□□□□ 0.97
RIPK1-201ENST00000259808 TONSLQ96HA7 1378 aa21.11■□□□□ 0.97
RIPK1-201ENST00000259808 SIN3AQ96ST3 1273 aa21.11■□□□□ 0.97
RIPK1-201ENST00000259808 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.96
RIPK1-201ENST00000259808 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
RIPK1-201ENST00000259808 BCL11AQ9H165 835 aa21.06■□□□□ 0.96
RIPK1-201ENST00000259808 RTL5Q5HYW3 569 aaPredicted RBP21.05■□□□□ 0.96
RIPK1-201ENST00000259808 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
RIPK1-201ENST00000259808 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
RIPK1-201ENST00000259808 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.96
RIPK1-201ENST00000259808 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
RIPK1-201ENST00000259808 WIZO95785 1651 aa20.99■□□□□ 0.95
RIPK1-201ENST00000259808 CCDC88BA6NC98 1476 aa20.99■□□□□ 0.95
RIPK1-201ENST00000259808 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
RIPK1-201ENST00000259808 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
RIPK1-201ENST00000259808 KANK4Q5T7N3 995 aaPredicted RBP20.94■□□□□ 0.94
RIPK1-201ENST00000259808 KDM2AQ9Y2K7 1162 aa20.93■□□□□ 0.94
RIPK1-201ENST00000259808 MRS2Q9HD23 443 aa20.89■□□□□ 0.94
RIPK1-201ENST00000259808 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
RIPK1-201ENST00000259808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.93
RIPK1-201ENST00000259808 NBR1Q14596 966 aa20.82■□□□□ 0.92
RIPK1-201ENST00000259808 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
RIPK1-201ENST00000259808 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
RIPK1-201ENST00000259808 RUSC2Q8N2Y8 1516 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms