Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 KRT18P13-201ENST00000400056 1290 ntBASIC15.12■□□□□ 0.01
SGO1Q5FBB7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 DNAJB3-202ENST00000449667 1266 ntBASIC15.12■□□□□ 0.01
SGO1Q5FBB7 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.12■□□□□ 0.01
SGO1Q5FBB7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 AC109322.1-201ENST00000524499 1264 ntBASIC15.12■□□□□ 0.01
SGO1Q5FBB7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 AC106881.1-201ENST00000605849 3329 ntBASIC15.12■□□□□ 0.01
SGO1Q5FBB7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGO1Q5FBB7 CICP11-201ENST00000434745 2827 ntBASIC15.12■□□□□ 0.01
SGO1Q5FBB7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 RPL37AP1-201ENST00000412502 279 ntBASIC15.11■□□□□ 0.01
SGO1Q5FBB7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 AP006288.1-201ENST00000446065 395 ntBASIC15.11■□□□□ 0.01
SGO1Q5FBB7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGO1Q5FBB7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 CICP24-201ENST00000605464 2705 ntBASIC15.1■□□□□ 0.01
SGO1Q5FBB7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms