RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 NISCHQ9Y2I1 1504 aa34.89■■■■□ 3.18
PDGFA-203ENST00000402802 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
PDGFA-203ENST00000402802 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
PDGFA-203ENST00000402802 DCAF8L2P0C7V8 631 aa29.15■■■□□ 2.26
PDGFA-203ENST00000402802 ABCC9O60706 1549 aa28.9■■■□□ 2.22
PDGFA-203ENST00000402802 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
PDGFA-203ENST00000402802 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
PDGFA-203ENST00000402802 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
PDGFA-203ENST00000402802 NACADO15069 1562 aa28.19■■■□□ 2.1
PDGFA-203ENST00000402802 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
PDGFA-203ENST00000402802 RB1CC1Q8TDY2 1594 aa27.98■■■□□ 2.07
PDGFA-203ENST00000402802 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
PDGFA-203ENST00000402802 UNC13AQ9UPW8 1703 aa27.51■■□□□ 1.99
PDGFA-203ENST00000402802 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
PDGFA-203ENST00000402802 CECR2Q9BXF3 1484 aa27.27■■□□□ 1.96
PDGFA-203ENST00000402802 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
PDGFA-203ENST00000402802 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
PDGFA-203ENST00000402802 MROH2BQ7Z745 1585 aa27.06■■□□□ 1.92
PDGFA-203ENST00000402802 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
PDGFA-203ENST00000402802 WIZO95785 1651 aa26.85■■□□□ 1.89
PDGFA-203ENST00000402802 SMARCA4P51532 1647 aa26.81■■□□□ 1.88
PDGFA-203ENST00000402802 HRCP23327 699 aa26.64■■□□□ 1.85
PDGFA-203ENST00000402802 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
PDGFA-203ENST00000402802 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
PDGFA-203ENST00000402802 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
PDGFA-203ENST00000402802 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
PDGFA-203ENST00000402802 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
PDGFA-203ENST00000402802 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
PDGFA-203ENST00000402802 SMARCA2P51531 1590 aa26.27■■□□□ 1.8
PDGFA-203ENST00000402802 BAZ1BQ9UIG0 1483 aaKnown RBP26.25■■□□□ 1.79
PDGFA-203ENST00000402802 NCAPD3P42695 1498 aa26.08■■□□□ 1.76
PDGFA-203ENST00000402802 PELP1Q8IZL8 1130 aaKnown RBP26.06■■□□□ 1.76
PDGFA-203ENST00000402802 CC2D2AQ9P2K1 1620 aa26.04■■□□□ 1.76
PDGFA-203ENST00000402802 HMGXB3Q12766 1538 aa26■■□□□ 1.75
PDGFA-203ENST00000402802 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
PDGFA-203ENST00000402802 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
PDGFA-203ENST00000402802 ABCC8Q09428 1581 aa25.84■■□□□ 1.73
PDGFA-203ENST00000402802 PPARGC1BQ86YN6 1023 aaKnown RBP25.83■■□□□ 1.73
PDGFA-203ENST00000402802 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
PDGFA-203ENST00000402802 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
PDGFA-203ENST00000402802 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
PDGFA-203ENST00000402802 CFTRP13569 1480 aa25.55■■□□□ 1.68
PDGFA-203ENST00000402802 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
PDGFA-203ENST00000402802 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
PDGFA-203ENST00000402802 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
PDGFA-203ENST00000402802 CADPSQ9ULU8 1353 aa25.48■■□□□ 1.67
PDGFA-203ENST00000402802 NESP48681 1621 aa25.41■■□□□ 1.66
PDGFA-203ENST00000402802 SOGA1O94964 1423 aa25.36■■□□□ 1.65
PDGFA-203ENST00000402802 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
PDGFA-203ENST00000402802 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
PDGFA-203ENST00000402802 CUX1P39880 1505 aa25.28■■□□□ 1.64
PDGFA-203ENST00000402802 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
PDGFA-203ENST00000402802 FANCD2Q9BXW9 1451 aa25.23■■□□□ 1.63
PDGFA-203ENST00000402802 BIVM-ERCC5R4GMW8 1640 aa25.2■■□□□ 1.62
PDGFA-203ENST00000402802 SCAF1Q9H7N4 1312 aaKnown RBP25.18■■□□□ 1.62
PDGFA-203ENST00000402802 TRIM26Q12899 539 aaPredicted RBP25.17■■□□□ 1.62
PDGFA-203ENST00000402802 MYT1Q01538 1121 aa25.16■■□□□ 1.62
PDGFA-203ENST00000402802 LAMC3Q9Y6N6 1575 aa25.15■■□□□ 1.62
PDGFA-203ENST00000402802 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
PDGFA-203ENST00000402802 CSRNP3Q8WYN3 585 aa25.09■■□□□ 1.61
PDGFA-203ENST00000402802 EEA1Q15075 1411 aa25.03■■□□□ 1.6
PDGFA-203ENST00000402802 CEP164Q9UPV0 1460 aa25.03■■□□□ 1.6
PDGFA-203ENST00000402802 PDS5BQ9NTI5 1447 aa25■■□□□ 1.59
PDGFA-203ENST00000402802 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
PDGFA-203ENST00000402802 KIF21AQ7Z4S6 1674 aa24.98■■□□□ 1.59
PDGFA-203ENST00000402802 TOPBP1Q92547 1522 aa24.95■■□□□ 1.58
PDGFA-203ENST00000402802 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
PDGFA-203ENST00000402802 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
PDGFA-203ENST00000402802 RAD54L2Q9Y4B4 1467 aa24.88■■□□□ 1.57
PDGFA-203ENST00000402802 UBTFP17480 764 aaKnown RBP24.87■■□□□ 1.57
PDGFA-203ENST00000402802 CUX2O14529 1486 aa24.86■■□□□ 1.57
PDGFA-203ENST00000402802 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
PDGFA-203ENST00000402802 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
PDGFA-203ENST00000402802 GOLGA3Q08378 1498 aa24.82■■□□□ 1.56
PDGFA-203ENST00000402802 RAPGEF2Q9Y4G8 1499 aa24.81■■□□□ 1.56
PDGFA-203ENST00000402802 KIF21BO75037 1637 aa24.77■■□□□ 1.56
PDGFA-203ENST00000402802 TNIKQ9UKE5 1360 aa24.74■■□□□ 1.55
PDGFA-203ENST00000402802 MRC2Q9UBG0 1479 aa24.71■■□□□ 1.55
PDGFA-203ENST00000402802 CEP162Q5TB80 1403 aa24.7■■□□□ 1.55
PDGFA-203ENST00000402802 PRXQ9BXM0 1461 aa24.7■■□□□ 1.54
PDGFA-203ENST00000402802 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
PDGFA-203ENST00000402802 IGF1RP08069 1367 aa24.69■■□□□ 1.54
PDGFA-203ENST00000402802 RANGAP1P46060 587 aaPredicted RBP24.68■■□□□ 1.54
PDGFA-203ENST00000402802 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
PDGFA-203ENST00000402802 TDRD9Q8NDG6 1382 aaKnown RBP24.65■■□□□ 1.54
PDGFA-203ENST00000402802 ACIN1Q9UKV3 1341 aaKnown RBP24.6■■□□□ 1.53
PDGFA-203ENST00000402802 WDR97A6NE52 1622 aa24.58■■□□□ 1.52
PDGFA-203ENST00000402802 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
PDGFA-203ENST00000402802 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
PDGFA-203ENST00000402802 WDR62O43379 1518 aa24.54■■□□□ 1.52
PDGFA-203ENST00000402802 TARBP1Q13395 1621 aaKnown RBP24.54■■□□□ 1.52
PDGFA-203ENST00000402802 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
PDGFA-203ENST00000402802 CLIP1P30622 1438 aa24.49■■□□□ 1.51
PDGFA-203ENST00000402802 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
PDGFA-203ENST00000402802 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
PDGFA-203ENST00000402802 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.51
PDGFA-203ENST00000402802 NEUROD1Q13562 356 aa24.44■■□□□ 1.5
PDGFA-203ENST00000402802 ZNF608Q9ULD9 1512 aaPredicted RBP24.43■■□□□ 1.5
PDGFA-203ENST00000402802 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
PDGFA-203ENST00000402802 TTBK1Q5TCY1 1321 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms