RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 NISCHQ9Y2I1 1504 aa39.75■■■■□ 3.95
SSNA1-204ENST00000464553 CCDC180Q9P1Z9 1646 aa35.39■■■■□ 3.26
SSNA1-204ENST00000464553 ABCC9O60706 1549 aa34.78■■■■□ 3.16
SSNA1-204ENST00000464553 RB1CC1Q8TDY2 1594 aa33.46■■■□□ 2.95
SSNA1-204ENST00000464553 NACADO15069 1562 aa33.41■■■□□ 2.94
SSNA1-204ENST00000464553 DCAF8L2P0C7V8 631 aa33.29■■■□□ 2.92
SSNA1-204ENST00000464553 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
SSNA1-204ENST00000464553 ZCCHC6Q5VYS8 1495 aaKnown RBP33.04■■■□□ 2.88
SSNA1-204ENST00000464553 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
SSNA1-204ENST00000464553 PABPN1Q86U42 306 aaKnown RBP eCLIP32.5■■■□□ 2.79
SSNA1-204ENST00000464553 UNC13AQ9UPW8 1703 aa32.49■■■□□ 2.79
SSNA1-204ENST00000464553 BICRAQ9NZM4 1560 aa32.37■■■□□ 2.77
SSNA1-204ENST00000464553 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
SSNA1-204ENST00000464553 DNAJC5BQ9UF47 199 aa32.17■■■□□ 2.74
SSNA1-204ENST00000464553 SCRIBQ14160 1630 aa32.15■■■□□ 2.74
SSNA1-204ENST00000464553 EIF4G1Q04637 1599 aaKnown RBP31.56■■■□□ 2.64
SSNA1-204ENST00000464553 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
SSNA1-204ENST00000464553 CECR2Q9BXF3 1484 aa31.34■■■□□ 2.61
SSNA1-204ENST00000464553 NCAPD3P42695 1498 aa30.87■■■□□ 2.53
SSNA1-204ENST00000464553 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
SSNA1-204ENST00000464553 SMARCA4P51532 1647 aa30.82■■■□□ 2.52
SSNA1-204ENST00000464553 ATAD2BQ9ULI0 1458 aa30.78■■■□□ 2.52
SSNA1-204ENST00000464553 SMARCA2P51531 1590 aa30.76■■■□□ 2.52
SSNA1-204ENST00000464553 HMGXB3Q12766 1538 aa30.63■■■□□ 2.49
SSNA1-204ENST00000464553 PEG3Q9GZU2 1588 aa30.62■■■□□ 2.49
SSNA1-204ENST00000464553 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
SSNA1-204ENST00000464553 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
SSNA1-204ENST00000464553 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
SSNA1-204ENST00000464553 WIZO95785 1651 aa30.16■■■□□ 2.42
SSNA1-204ENST00000464553 ERCC6Q03468 1493 aa30.05■■■□□ 2.4
SSNA1-204ENST00000464553 LAMC3Q9Y6N6 1575 aa30.03■■■□□ 2.4
SSNA1-204ENST00000464553 NESP48681 1621 aa30■■■□□ 2.39
SSNA1-204ENST00000464553 CADPSQ9ULU8 1353 aa29.95■■■□□ 2.39
SSNA1-204ENST00000464553 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
SSNA1-204ENST00000464553 PDS5BQ9NTI5 1447 aa29.9■■■□□ 2.38
SSNA1-204ENST00000464553 CUX2O14529 1486 aa29.88■■■□□ 2.37
SSNA1-204ENST00000464553 CFTRP13569 1480 aa29.7■■■□□ 2.35
SSNA1-204ENST00000464553 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
SSNA1-204ENST00000464553 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
SSNA1-204ENST00000464553 KIF21AQ7Z4S6 1674 aa29.59■■■□□ 2.33
SSNA1-204ENST00000464553 FANCD2Q9BXW9 1451 aa29.53■■■□□ 2.32
SSNA1-204ENST00000464553 MRC2Q9UBG0 1479 aa29.52■■■□□ 2.32
SSNA1-204ENST00000464553 CEP164Q9UPV0 1460 aa29.51■■■□□ 2.31
SSNA1-204ENST00000464553 WDR62O43379 1518 aa29.4■■■□□ 2.3
SSNA1-204ENST00000464553 PRDM2Q13029 1718 aa29.28■■■□□ 2.28
SSNA1-204ENST00000464553 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
SSNA1-204ENST00000464553 SUPT5HO00267 1087 aaKnown RBP29.24■■■□□ 2.27
SSNA1-204ENST00000464553 URB2Q14146 1524 aaKnown RBP29.2■■■□□ 2.27
SSNA1-204ENST00000464553 ABCC8Q09428 1581 aa29.15■■■□□ 2.26
SSNA1-204ENST00000464553 TOPBP1Q92547 1522 aa29.02■■■□□ 2.24
SSNA1-204ENST00000464553 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
SSNA1-204ENST00000464553 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
SSNA1-204ENST00000464553 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
SSNA1-204ENST00000464553 ZNF608Q9ULD9 1512 aaPredicted RBP28.73■■■□□ 2.19
SSNA1-204ENST00000464553 SOGA1O94964 1423 aa28.69■■■□□ 2.18
SSNA1-204ENST00000464553 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
SSNA1-204ENST00000464553 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
SSNA1-204ENST00000464553 CUX1P39880 1505 aa28.69■■■□□ 2.18
SSNA1-204ENST00000464553 FGD5Q6ZNL6 1462 aa28.64■■■□□ 2.17
SSNA1-204ENST00000464553 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
SSNA1-204ENST00000464553 AQRO60306 1485 aaKnown RBP eCLIP28.58■■■□□ 2.17
SSNA1-204ENST00000464553 EIF4G3O43432 1585 aaKnown RBP28.57■■■□□ 2.16
SSNA1-204ENST00000464553 WDR97A6NE52 1622 aa28.56■■■□□ 2.16
SSNA1-204ENST00000464553 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
SSNA1-204ENST00000464553 WRNQ14191 1432 aaPredicted RBP eCLIP28.5■■■□□ 2.15
SSNA1-204ENST00000464553 ABCA10Q8WWZ4 1543 aa28.42■■■□□ 2.14
SSNA1-204ENST00000464553 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
SSNA1-204ENST00000464553 GRIN2BQ13224 1484 aa28.39■■■□□ 2.13
SSNA1-204ENST00000464553 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
SSNA1-204ENST00000464553 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
SSNA1-204ENST00000464553 MAGI1Q96QZ7 1491 aaPredicted RBP28.34■■■□□ 2.13
SSNA1-204ENST00000464553 FBLN2P98095 1184 aa28.31■■■□□ 2.12
SSNA1-204ENST00000464553 SYNJ1O43426 1573 aa28.31■■■□□ 2.12
SSNA1-204ENST00000464553 SNAPC4Q5SXM2 1469 aa28.28■■■□□ 2.12
SSNA1-204ENST00000464553 CHMP7Q8WUX9 453 aaPredicted RBP28.28■■■□□ 2.12
SSNA1-204ENST00000464553 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
SSNA1-204ENST00000464553 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
SSNA1-204ENST00000464553 CHD1O14646 1710 aa28.2■■■□□ 2.1
SSNA1-204ENST00000464553 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
SSNA1-204ENST00000464553 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
SSNA1-204ENST00000464553 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
SSNA1-204ENST00000464553 ARHGEF11O15085 1522 aa28.05■■■□□ 2.08
SSNA1-204ENST00000464553 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
SSNA1-204ENST00000464553 RIMBP3CA6NJZ7 1639 aa28.03■■■□□ 2.08
SSNA1-204ENST00000464553 RIMBP3BA6NNM3 1639 aa28.03■■■□□ 2.08
SSNA1-204ENST00000464553 RIMBP3Q9UFD9 1639 aa28.03■■■□□ 2.08
SSNA1-204ENST00000464553 CLASP1Q7Z460 1538 aa28■■■□□ 2.07
SSNA1-204ENST00000464553 GRIN2AQ12879 1464 aa27.97■■■□□ 2.07
SSNA1-204ENST00000464553 KIF27Q86VH2 1401 aa27.96■■■□□ 2.07
SSNA1-204ENST00000464553 ADAMTS12P58397 1594 aa27.95■■■□□ 2.07
SSNA1-204ENST00000464553 NUP160Q12769 1436 aa27.9■■■□□ 2.06
SSNA1-204ENST00000464553 IGF1RP08069 1367 aa27.88■■■□□ 2.05
SSNA1-204ENST00000464553 CYB5RLQ6IPT4 315 aa27.88■■■□□ 2.05
SSNA1-204ENST00000464553 ARAP1Q96P48 1450 aa27.8■■■□□ 2.04
SSNA1-204ENST00000464553 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
SSNA1-204ENST00000464553 CUL7Q14999 1698 aa27.72■■■□□ 2.03
SSNA1-204ENST00000464553 CARMIL1Q5VZK9 1371 aa27.71■■■□□ 2.03
SSNA1-204ENST00000464553 JPH4Q96JJ6 628 aa27.68■■■□□ 2.02
SSNA1-204ENST00000464553 SHROOM2Q13796 1616 aa27.64■■■□□ 2.02
SSNA1-204ENST00000464553 KIAA0586Q9BVV6 1533 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms