RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 NISCHQ9Y2I1 1504 aa39.81■■■■□ 3.96
BEST1-205ENST00000526988 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
BEST1-205ENST00000526988 ABCC9O60706 1549 aa35.19■■■■□ 3.22
BEST1-205ENST00000526988 DCAF8L2P0C7V8 631 aa33.64■■■□□ 2.98
BEST1-205ENST00000526988 RB1CC1Q8TDY2 1594 aa33.6■■■□□ 2.97
BEST1-205ENST00000526988 NACADO15069 1562 aa33.47■■■□□ 2.95
BEST1-205ENST00000526988 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
BEST1-205ENST00000526988 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
BEST1-205ENST00000526988 PABPN1Q86U42 306 aaKnown RBP eCLIP32.92■■■□□ 2.86
BEST1-205ENST00000526988 DCAF1Q9Y4B6 1507 aa32.85■■■□□ 2.85
BEST1-205ENST00000526988 UNC13AQ9UPW8 1703 aa32.72■■■□□ 2.83
BEST1-205ENST00000526988 DNAJC5BQ9UF47 199 aa32.66■■■□□ 2.82
BEST1-205ENST00000526988 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
BEST1-205ENST00000526988 SCRIBQ14160 1630 aa32.42■■■□□ 2.78
BEST1-205ENST00000526988 SHROOM4Q9ULL8 1493 aa32.16■■■□□ 2.74
BEST1-205ENST00000526988 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
BEST1-205ENST00000526988 CC2D2AQ9P2K1 1620 aa31.73■■■□□ 2.67
BEST1-205ENST00000526988 CECR2Q9BXF3 1484 aa31.64■■■□□ 2.66
BEST1-205ENST00000526988 SMARCA4P51532 1647 aa30.93■■■□□ 2.54
BEST1-205ENST00000526988 NCAPD3P42695 1498 aa30.92■■■□□ 2.54
BEST1-205ENST00000526988 ATAD2BQ9ULI0 1458 aa30.9■■■□□ 2.54
BEST1-205ENST00000526988 BAZ1AQ9NRL2 1556 aaPredicted RBP30.86■■■□□ 2.53
BEST1-205ENST00000526988 SMARCA2P51531 1590 aa30.81■■■□□ 2.52
BEST1-205ENST00000526988 MROH2BQ7Z745 1585 aa30.69■■■□□ 2.5
BEST1-205ENST00000526988 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
BEST1-205ENST00000526988 BAZ1BQ9UIG0 1483 aaKnown RBP30.64■■■□□ 2.5
BEST1-205ENST00000526988 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
BEST1-205ENST00000526988 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
BEST1-205ENST00000526988 NESP48681 1621 aa30.33■■■□□ 2.45
BEST1-205ENST00000526988 WIZO95785 1651 aa30.31■■■□□ 2.44
BEST1-205ENST00000526988 RSF1Q96T23 1441 aaPredicted RBP30.24■■■□□ 2.43
BEST1-205ENST00000526988 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
BEST1-205ENST00000526988 CUX2O14529 1486 aa30.09■■■□□ 2.41
BEST1-205ENST00000526988 CADPSQ9ULU8 1353 aa30.05■■■□□ 2.4
BEST1-205ENST00000526988 PDS5BQ9NTI5 1447 aa30.02■■■□□ 2.4
BEST1-205ENST00000526988 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
BEST1-205ENST00000526988 KIF21AQ7Z4S6 1674 aa29.85■■■□□ 2.37
BEST1-205ENST00000526988 THOC2Q8NI27 1593 aaKnown RBP29.84■■■□□ 2.37
BEST1-205ENST00000526988 CFTRP13569 1480 aa29.75■■■□□ 2.35
BEST1-205ENST00000526988 MRC2Q9UBG0 1479 aa29.7■■■□□ 2.35
BEST1-205ENST00000526988 FANCD2Q9BXW9 1451 aa29.69■■■□□ 2.34
BEST1-205ENST00000526988 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
BEST1-205ENST00000526988 DNAJC5Q9H3Z4 198 aa29.68■■■□□ 2.34
BEST1-205ENST00000526988 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
BEST1-205ENST00000526988 WDR62O43379 1518 aa29.56■■■□□ 2.32
BEST1-205ENST00000526988 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
BEST1-205ENST00000526988 SUPT5HO00267 1087 aaKnown RBP29.37■■■□□ 2.29
BEST1-205ENST00000526988 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
BEST1-205ENST00000526988 TOPBP1Q92547 1522 aa29.15■■■□□ 2.26
BEST1-205ENST00000526988 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
BEST1-205ENST00000526988 IFT140Q96RY7 1462 aa29.07■■■□□ 2.24
BEST1-205ENST00000526988 DNMBPQ6XZF7 1577 aa29.06■■■□□ 2.24
BEST1-205ENST00000526988 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
BEST1-205ENST00000526988 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
BEST1-205ENST00000526988 POLA1P09884 1462 aaPredicted RBP28.89■■■□□ 2.22
BEST1-205ENST00000526988 SOGA1O94964 1423 aa28.83■■■□□ 2.21
BEST1-205ENST00000526988 TARBP1Q13395 1621 aaKnown RBP28.81■■■□□ 2.2
BEST1-205ENST00000526988 AQRO60306 1485 aaKnown RBP eCLIP28.81■■■□□ 2.2
BEST1-205ENST00000526988 RAD54L2Q9Y4B4 1467 aa28.81■■■□□ 2.2
BEST1-205ENST00000526988 CUX1P39880 1505 aa28.8■■■□□ 2.2
BEST1-205ENST00000526988 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
BEST1-205ENST00000526988 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
BEST1-205ENST00000526988 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
BEST1-205ENST00000526988 FBLN2P98095 1184 aa28.65■■■□□ 2.18
BEST1-205ENST00000526988 TRIM41Q8WV44 630 aa28.64■■■□□ 2.18
BEST1-205ENST00000526988 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.16
BEST1-205ENST00000526988 WDR97A6NE52 1622 aa28.52■■■□□ 2.16
BEST1-205ENST00000526988 SNAPC4Q5SXM2 1469 aa28.51■■■□□ 2.15
BEST1-205ENST00000526988 GRIN2BQ13224 1484 aa28.49■■■□□ 2.15
BEST1-205ENST00000526988 CHMP7Q8WUX9 453 aaPredicted RBP28.47■■■□□ 2.15
BEST1-205ENST00000526988 CHD1O14646 1710 aa28.46■■■□□ 2.15
BEST1-205ENST00000526988 GAPVD1Q14C86 1478 aa28.46■■■□□ 2.15
BEST1-205ENST00000526988 ABCA10Q8WWZ4 1543 aa28.45■■■□□ 2.15
BEST1-205ENST00000526988 TOP2BQ02880 1626 aa28.43■■■□□ 2.14
BEST1-205ENST00000526988 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
BEST1-205ENST00000526988 MAGI1Q96QZ7 1491 aaPredicted RBP28.42■■■□□ 2.14
BEST1-205ENST00000526988 BIVM-ERCC5R4GMW8 1640 aa28.39■■■□□ 2.13
BEST1-205ENST00000526988 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
BEST1-205ENST00000526988 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
BEST1-205ENST00000526988 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
BEST1-205ENST00000526988 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
BEST1-205ENST00000526988 ARHGEF11O15085 1522 aa28.33■■■□□ 2.13
BEST1-205ENST00000526988 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
BEST1-205ENST00000526988 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
BEST1-205ENST00000526988 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
BEST1-205ENST00000526988 CLASP1Q7Z460 1538 aa28.17■■■□□ 2.1
BEST1-205ENST00000526988 FHAD1B1AJZ9 1412 aa28.11■■■□□ 2.09
BEST1-205ENST00000526988 GRIN2AQ12879 1464 aa28.1■■■□□ 2.09
BEST1-205ENST00000526988 ADAMTS12P58397 1594 aa28.1■■■□□ 2.09
BEST1-205ENST00000526988 ARAP1Q96P48 1450 aa28.09■■■□□ 2.09
BEST1-205ENST00000526988 ERICH3Q5RHP9 1530 aa28.09■■■□□ 2.09
BEST1-205ENST00000526988 NUP160Q12769 1436 aa27.99■■■□□ 2.07
BEST1-205ENST00000526988 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
BEST1-205ENST00000526988 CEP170Q5SW79 1584 aa27.95■■■□□ 2.07
BEST1-205ENST00000526988 IGF1RP08069 1367 aa27.91■■■□□ 2.06
BEST1-205ENST00000526988 TRHP20396 242 aaPredicted RBP27.82■■■□□ 2.04
BEST1-205ENST00000526988 ERCC6L2Q5T890 1561 aa27.81■■■□□ 2.04
BEST1-205ENST00000526988 JPH4Q96JJ6 628 aa27.8■■■□□ 2.04
BEST1-205ENST00000526988 CARMIL1Q5VZK9 1371 aa27.75■■■□□ 2.03
BEST1-205ENST00000526988 CUL7Q14999 1698 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 602.6 ms