Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF13O43567 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF13O43567 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF13O43567 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RNF13O43567 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF13O43567 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.17□□□□□ -0.14
RNF13O43567 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF13O43567 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RNF13O43567 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF13O43567 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF13O43567 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.16□□□□□ -0.14
RNF13O43567 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RNF13O43567 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF13O43567 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF13O43567 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF13O43567 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF13O43567 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RNF13O43567 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RNF13O43567 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF13O43567 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF13O43567 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 AC136604.1-201ENST00000418535 575 ntBASIC14.16□□□□□ -0.14
RNF13O43567 AL645939.2-201ENST00000427340 991 ntBASIC14.16□□□□□ -0.14
RNF13O43567 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF13O43567 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF13O43567 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.16□□□□□ -0.14
RNF13O43567 AC069262.1-201ENST00000539058 672 ntBASIC14.16□□□□□ -0.14
RNF13O43567 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF13O43567 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF13O43567 AL691403.2-201ENST00000618460 490 ntBASIC14.16□□□□□ -0.14
RNF13O43567 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF13O43567 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF13O43567 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF13O43567 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF13O43567 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
RNF13O43567 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF13O43567 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF13O43567 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF13O43567 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RNF13O43567 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF13O43567 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 TSEN15P1-201ENST00000423257 515 ntBASIC14.15□□□□□ -0.14
RNF13O43567 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.15□□□□□ -0.14
RNF13O43567 SERBP1P3-201ENST00000459980 809 ntBASIC14.15□□□□□ -0.14
RNF13O43567 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.15□□□□□ -0.14
RNF13O43567 HLA-J-203ENST00000494367 1087 ntBASIC14.15□□□□□ -0.14
RNF13O43567 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.15□□□□□ -0.14
RNF13O43567 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms