Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 AL592295.1-201ENST00000400984 884 ntBASIC21.35■■□□□ 1.01
GKN3PP0CG01 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.35■■□□□ 1.01
GKN3PP0CG01 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GKN3PP0CG01 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.35■■□□□ 1.01
GKN3PP0CG01 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GKN3PP0CG01 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.34■■□□□ 1.01
GKN3PP0CG01 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GKN3PP0CG01 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GKN3PP0CG01 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GKN3PP0CG01 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GKN3PP0CG01 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GKN3PP0CG01 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.33■■□□□ 1.01
GKN3PP0CG01 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GKN3PP0CG01 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GKN3PP0CG01 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1.01
GKN3PP0CG01 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.33■■□□□ 1.01
GKN3PP0CG01 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
GKN3PP0CG01 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
GKN3PP0CG01 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.32■■□□□ 1
GKN3PP0CG01 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GKN3PP0CG01 AC090877.2-201ENST00000558441 1738 ntBASIC21.32■■□□□ 1
GKN3PP0CG01 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.32■■□□□ 1
GKN3PP0CG01 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GKN3PP0CG01 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.32■■□□□ 1
GKN3PP0CG01 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GKN3PP0CG01 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GKN3PP0CG01 ABCB10P4-201ENST00000566803 2184 ntBASIC21.31■■□□□ 1
GKN3PP0CG01 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GKN3PP0CG01 AC004987.1-201ENST00000428627 508 ntBASIC21.31■■□□□ 1
GKN3PP0CG01 AC139795.1-202ENST00000500444 432 ntBASIC21.31■■□□□ 1
GKN3PP0CG01 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.31■■□□□ 1
GKN3PP0CG01 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.31■■□□□ 1
GKN3PP0CG01 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.31■■□□□ 1
GKN3PP0CG01 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.31■■□□□ 1
GKN3PP0CG01 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GKN3PP0CG01 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.3■■□□□ 1
GKN3PP0CG01 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GKN3PP0CG01 ATP5G2P3-201ENST00000429083 425 ntBASIC21.3■■□□□ 1
GKN3PP0CG01 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
GKN3PP0CG01 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.3■■□□□ 1
GKN3PP0CG01 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GKN3PP0CG01 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GKN3PP0CG01 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.29■■□□□ 1
GKN3PP0CG01 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
GKN3PP0CG01 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
GKN3PP0CG01 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
GKN3PP0CG01 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.29■■□□□ 1
GKN3PP0CG01 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.29■■□□□ 1
GKN3PP0CG01 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
GKN3PP0CG01 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.29■■□□□ 1
GKN3PP0CG01 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
GKN3PP0CG01 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.29■■□□□ 1
GKN3PP0CG01 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GKN3PP0CG01 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.28■■□□□ 1
GKN3PP0CG01 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GKN3PP0CG01 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
GKN3PP0CG01 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
GKN3PP0CG01 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.28■■□□□ 1
GKN3PP0CG01 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
GKN3PP0CG01 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.28■■□□□ 1
GKN3PP0CG01 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GKN3PP0CG01 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
GKN3PP0CG01 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
GKN3PP0CG01 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.28■■□□□ 1
GKN3PP0CG01 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
GKN3PP0CG01 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GKN3PP0CG01 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GKN3PP0CG01 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GKN3PP0CG01 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.27■■□□□ 1
GKN3PP0CG01 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
GKN3PP0CG01 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GKN3PP0CG01 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.27■■□□□ 1
GKN3PP0CG01 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
GKN3PP0CG01 BHLHE23-202ENST00000612929 1109 ntBASIC21.27■■□□□ 1
GKN3PP0CG01 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GKN3PP0CG01 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GKN3PP0CG01 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
GKN3PP0CG01 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.27■□□□□ 0.99
GKN3PP0CG01 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
GKN3PP0CG01 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.27■□□□□ 0.99
GKN3PP0CG01 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
GKN3PP0CG01 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
GKN3PP0CG01 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GKN3PP0CG01 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GKN3PP0CG01 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GKN3PP0CG01 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GKN3PP0CG01 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.26■□□□□ 0.99
GKN3PP0CG01 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.26■□□□□ 0.99
GKN3PP0CG01 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.26■□□□□ 0.99
GKN3PP0CG01 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GKN3PP0CG01 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GKN3PP0CG01 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GKN3PP0CG01 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GKN3PP0CG01 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GKN3PP0CG01 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GKN3PP0CG01 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.25■□□□□ 0.99
GKN3PP0CG01 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GKN3PP0CG01 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.25■□□□□ 0.99
GKN3PP0CG01 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GKN3PP0CG01 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms