Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D1AO60880 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SH2D1AO60880 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.31■□□□□ 0.36
SH2D1AO60880 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D1AO60880 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D1AO60880 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D1AO60880 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D1AO60880 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D1AO60880 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D1AO60880 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.3■□□□□ 0.36
SH2D1AO60880 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.3■□□□□ 0.36
SH2D1AO60880 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D1AO60880 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SH2D1AO60880 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.3■□□□□ 0.36
SH2D1AO60880 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SH2D1AO60880 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D1AO60880 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.29■□□□□ 0.36
SH2D1AO60880 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D1AO60880 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D1AO60880 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D1AO60880 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D1AO60880 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D1AO60880 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D1AO60880 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SH2D1AO60880 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SH2D1AO60880 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SH2D1AO60880 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.28■□□□□ 0.36
SH2D1AO60880 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.28■□□□□ 0.36
SH2D1AO60880 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SH2D1AO60880 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.28■□□□□ 0.36
SH2D1AO60880 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.28■□□□□ 0.36
SH2D1AO60880 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
SH2D1AO60880 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SH2D1AO60880 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SH2D1AO60880 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SH2D1AO60880 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SH2D1AO60880 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SH2D1AO60880 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SH2D1AO60880 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SH2D1AO60880 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SH2D1AO60880 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SH2D1AO60880 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.27■□□□□ 0.36
SH2D1AO60880 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SH2D1AO60880 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SH2D1AO60880 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.27■□□□□ 0.36
SH2D1AO60880 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SH2D1AO60880 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SH2D1AO60880 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SH2D1AO60880 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SH2D1AO60880 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.27■□□□□ 0.35
SH2D1AO60880 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SH2D1AO60880 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SH2D1AO60880 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.26■□□□□ 0.35
SH2D1AO60880 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.26■□□□□ 0.35
SH2D1AO60880 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SH2D1AO60880 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.25■□□□□ 0.35
SH2D1AO60880 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH2D1AO60880 SMPD5-203ENST00000639008 1464 ntBASIC17.25■□□□□ 0.35
SH2D1AO60880 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.25■□□□□ 0.35
SH2D1AO60880 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH2D1AO60880 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.25■□□□□ 0.35
SH2D1AO60880 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.25■□□□□ 0.35
SH2D1AO60880 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH2D1AO60880 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SH2D1AO60880 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH2D1AO60880 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH2D1AO60880 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.25■□□□□ 0.35
SH2D1AO60880 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SH2D1AO60880 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SH2D1AO60880 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SH2D1AO60880 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH2D1AO60880 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.24■□□□□ 0.35
SH2D1AO60880 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.24■□□□□ 0.35
SH2D1AO60880 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SH2D1AO60880 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH2D1AO60880 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SH2D1AO60880 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH2D1AO60880 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH2D1AO60880 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.24■□□□□ 0.35
SH2D1AO60880 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH2D1AO60880 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
SH2D1AO60880 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH2D1AO60880 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH2D1AO60880 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH2D1AO60880 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH2D1AO60880 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SH2D1AO60880 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH2D1AO60880 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SH2D1AO60880 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH2D1AO60880 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH2D1AO60880 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms