Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AGAP7P-201ENST00000582299 2062 ntBASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AGAP14-201ENST00000624701 2060 ntBASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 HIST3H2BA-201ENST00000436555 524 ntBASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AC027369.6-201ENST00000525520 931 ntBASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AL138828.2-201ENST00000615812 383 ntBASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AL033527.5-202ENST00000641632 1098 ntBASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 AC091951.1-201ENST00000512854 2465 ntBASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAPPC4Q9Y296 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 AL359183.1-201ENST00000623796 2132 ntBASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 PMS2P2-201ENST00000425039 1128 ntBASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 AC097493.3-201ENST00000509725 367 ntBASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 TEX28P1-201ENST00000613479 1221 ntBASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 TEX28P2-201ENST00000617764 1221 ntBASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 SPDYE12P-201ENST00000618416 771 ntBASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 AC112693.3-201ENST00000624819 1983 ntBASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAPPC4Q9Y296 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAPPC4Q9Y296 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC4Q9Y296 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC4Q9Y296 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC4Q9Y296 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAPPC4Q9Y296 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAPPC4Q9Y296 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC4Q9Y296 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms