RNA–Protein interactions for RNA: ENST00000287771.9

RBPMS-201, Transcript of RNA binding protein, mRNA processing factor, humanhuman

TSL 1 (best) BASIC

Gene RBPMS, Length 2,974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-201ENST00000287771 NISCHQ9Y2I1 1504 aa28.36■■■□□ 2.13
RBPMS-201ENST00000287771 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
RBPMS-201ENST00000287771 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
RBPMS-201ENST00000287771 HRCP23327 699 aa24.84■■□□□ 1.57
RBPMS-201ENST00000287771 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
RBPMS-201ENST00000287771 PCGF6Q9BYE7 350 aa24.48■■□□□ 1.51
RBPMS-201ENST00000287771 CHIC1Q5VXU3 224 aa24.4■■□□□ 1.5
RBPMS-201ENST00000287771 PPARGC1BQ86YN6 1023 aaKnown RBP24.38■■□□□ 1.49
RBPMS-201ENST00000287771 ZCCHC6Q5VYS8 1495 aaKnown RBP24.09■■□□□ 1.45
RBPMS-201ENST00000287771 DCAF1Q9Y4B6 1507 aa23.9■■□□□ 1.42
RBPMS-201ENST00000287771 LOC105371045A0A1W2PR82 267 aa23.85■■□□□ 1.41
RBPMS-201ENST00000287771 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
RBPMS-201ENST00000287771 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
RBPMS-201ENST00000287771 PELP1Q8IZL8 1130 aaKnown RBP23.64■■□□□ 1.37
RBPMS-201ENST00000287771 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
RBPMS-201ENST00000287771 ZEB1P37275 1124 aaPredicted RBP23.44■■□□□ 1.34
RBPMS-201ENST00000287771 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
RBPMS-201ENST00000287771 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
RBPMS-201ENST00000287771 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
RBPMS-201ENST00000287771 EHMT2Q96KQ7 1210 aa22.94■■□□□ 1.26
RBPMS-201ENST00000287771 ACIN1Q9UKV3 1341 aaKnown RBP22.89■■□□□ 1.26
RBPMS-201ENST00000287771 ABCC9O60706 1549 aa22.86■■□□□ 1.25
RBPMS-201ENST00000287771 NEUROD1Q13562 356 aa22.85■■□□□ 1.25
RBPMS-201ENST00000287771 RSF1Q96T23 1441 aaPredicted RBP22.79■■□□□ 1.24
RBPMS-201ENST00000287771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.76■■□□□ 1.23
RBPMS-201ENST00000287771 GTF3C3Q9Y5Q9 886 aa22.72■■□□□ 1.23
RBPMS-201ENST00000287771 CCER1Q8TC90 406 aaPredicted RBP22.71■■□□□ 1.23
RBPMS-201ENST00000287771 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
RBPMS-201ENST00000287771 CENPBP07199 599 aaPredicted RBP22.64■■□□□ 1.21
RBPMS-201ENST00000287771 MYT1Q01538 1121 aa22.63■■□□□ 1.21
RBPMS-201ENST00000287771 DIEXFQ68CQ4 756 aaKnown RBP22.63■■□□□ 1.21
RBPMS-201ENST00000287771 SCRIBQ14160 1630 aa22.52■■□□□ 1.2
RBPMS-201ENST00000287771 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
RBPMS-201ENST00000287771 YTHDC1Q96MU7 727 aaKnown RBP22.27■■□□□ 1.16
RBPMS-201ENST00000287771 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
RBPMS-201ENST00000287771 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
RBPMS-201ENST00000287771 MROH2BQ7Z745 1585 aa22.17■■□□□ 1.14
RBPMS-201ENST00000287771 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
RBPMS-201ENST00000287771 WIZO95785 1651 aa22.09■■□□□ 1.13
RBPMS-201ENST00000287771 MIER1Q8N108 512 aa22.07■■□□□ 1.12
RBPMS-201ENST00000287771 CEP162Q5TB80 1403 aa22.05■■□□□ 1.12
RBPMS-201ENST00000287771 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
RBPMS-201ENST00000287771 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
RBPMS-201ENST00000287771 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
RBPMS-201ENST00000287771 TNIKQ9UKE5 1360 aa21.9■■□□□ 1.1
RBPMS-201ENST00000287771 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.09
RBPMS-201ENST00000287771 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
RBPMS-201ENST00000287771 SOGA1O94964 1423 aa21.86■■□□□ 1.09
RBPMS-201ENST00000287771 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
RBPMS-201ENST00000287771 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
RBPMS-201ENST00000287771 NACADO15069 1562 aa21.74■■□□□ 1.07
RBPMS-201ENST00000287771 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
RBPMS-201ENST00000287771 EEA1Q15075 1411 aa21.67■■□□□ 1.06
RBPMS-201ENST00000287771 SUPT16HQ9Y5B9 1047 aaKnown RBP21.66■■□□□ 1.06
RBPMS-201ENST00000287771 GOLGA3Q08378 1498 aa21.65■■□□□ 1.06
RBPMS-201ENST00000287771 TOP2AP11388 1531 aaKnown RBP21.64■■□□□ 1.05
RBPMS-201ENST00000287771 SMARCA2P51531 1590 aa21.58■■□□□ 1.05
RBPMS-201ENST00000287771 CLSPNQ9HAW4 1339 aa21.57■■□□□ 1.04
RBPMS-201ENST00000287771 APLP2Q06481 763 aa21.51■■□□□ 1.03
RBPMS-201ENST00000287771 TSHZ2Q9NRE2 1034 aa21.51■■□□□ 1.03
RBPMS-201ENST00000287771 CLIP1P30622 1438 aa21.49■■□□□ 1.03
RBPMS-201ENST00000287771 ANP32EQ9BTT0 268 aa21.45■■□□□ 1.02
RBPMS-201ENST00000287771 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
RBPMS-201ENST00000287771 VPS8Q8N3P4 1428 aa21.44■■□□□ 1.02
RBPMS-201ENST00000287771 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
RBPMS-201ENST00000287771 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
RBPMS-201ENST00000287771 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
RBPMS-201ENST00000287771 KIF21BO75037 1637 aa21.34■■□□□ 1.01
RBPMS-201ENST00000287771 BCANQ96GW7 911 aa21.26■□□□□ 0.99
RBPMS-201ENST00000287771 BCL11AQ9H165 835 aa21.26■□□□□ 0.99
RBPMS-201ENST00000287771 RAPGEF2Q9Y4G8 1499 aa21.26■□□□□ 0.99
RBPMS-201ENST00000287771 KCNH8Q96L42 1107 aa21.26■□□□□ 0.99
RBPMS-201ENST00000287771 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
RBPMS-201ENST00000287771 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
RBPMS-201ENST00000287771 FKBP8Q14318 412 aa21.15■□□□□ 0.98
RBPMS-201ENST00000287771 KANK4Q5T7N3 995 aaPredicted RBP21.15■□□□□ 0.98
RBPMS-201ENST00000287771 ITGAEP38570 1179 aa21.06■□□□□ 0.96
RBPMS-201ENST00000287771 RBM19Q9Y4C8 960 aaKnown RBP21.03■□□□□ 0.96
RBPMS-201ENST00000287771 RRBP1Q9P2E9 1410 aaKnown RBP21.02■□□□□ 0.96
RBPMS-201ENST00000287771 ARAP1Q96P48 1450 aa21.02■□□□□ 0.95
RBPMS-201ENST00000287771 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
RBPMS-201ENST00000287771 DDX10Q13206 875 aaKnown RBP21.01■□□□□ 0.95
RBPMS-201ENST00000287771 NEFLP07196 543 aa20.98■□□□□ 0.95
RBPMS-201ENST00000287771 CUX2O14529 1486 aa20.96■□□□□ 0.95
RBPMS-201ENST00000287771 CCNB3Q8WWL7 1395 aa20.96■□□□□ 0.95
RBPMS-201ENST00000287771 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
RBPMS-201ENST00000287771 RAB3GAP2Q9H2M9 1393 aa20.91■□□□□ 0.94
RBPMS-201ENST00000287771 TRIM52Q96A61 297 aa20.91■□□□□ 0.94
RBPMS-201ENST00000287771 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
RBPMS-201ENST00000287771 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
RBPMS-201ENST00000287771 MAPKBP1O60336 1514 aa20.88■□□□□ 0.93
RBPMS-201ENST00000287771 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
RBPMS-201ENST00000287771 TOP2BQ02880 1626 aa20.85■□□□□ 0.93
RBPMS-201ENST00000287771 SIN3AQ96ST3 1273 aa20.85■□□□□ 0.93
RBPMS-201ENST00000287771 PPP1R15AO75807 674 aaPredicted RBP20.83■□□□□ 0.93
RBPMS-201ENST00000287771 HIRIP3Q9BW71 556 aaPredicted RBP20.83■□□□□ 0.93
RBPMS-201ENST00000287771 WDR97A6NE52 1622 aa20.83■□□□□ 0.92
RBPMS-201ENST00000287771 MSH5O43196 834 aa20.82■□□□□ 0.92
RBPMS-201ENST00000287771 ANP32CO43423 234 aa20.78■□□□□ 0.92
RBPMS-201ENST00000287771 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms