RNA–Protein interactions for RNA: ENST00000601415.5

ZNF550-208, Transcript of zinc finger protein 550, humanhuman

TSL 4 BASIC

Gene ZNF550, Length 515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-208ENST00000601415 NISCHQ9Y2I1 1504 aa39.69■■■■□ 3.94
ZNF550-208ENST00000601415 CCDC180Q9P1Z9 1646 aa35.42■■■■□ 3.26
ZNF550-208ENST00000601415 ABCC9O60706 1549 aa35.33■■■■□ 3.25
ZNF550-208ENST00000601415 DCAF8L2P0C7V8 631 aa33.72■■■□□ 2.99
ZNF550-208ENST00000601415 RB1CC1Q8TDY2 1594 aa33.69■■■□□ 2.98
ZNF550-208ENST00000601415 NACADO15069 1562 aa33.51■■■□□ 2.95
ZNF550-208ENST00000601415 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.88
ZNF550-208ENST00000601415 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
ZNF550-208ENST00000601415 DNAJC5BQ9UF47 199 aa32.91■■■□□ 2.86
ZNF550-208ENST00000601415 ZCCHC6Q5VYS8 1495 aaKnown RBP32.9■■■□□ 2.86
ZNF550-208ENST00000601415 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
ZNF550-208ENST00000601415 DCAF1Q9Y4B6 1507 aa32.75■■■□□ 2.83
ZNF550-208ENST00000601415 BICRAQ9NZM4 1560 aa32.6■■■□□ 2.81
ZNF550-208ENST00000601415 SCRIBQ14160 1630 aa32.38■■■□□ 2.77
ZNF550-208ENST00000601415 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
ZNF550-208ENST00000601415 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
ZNF550-208ENST00000601415 EIF4G1Q04637 1599 aaKnown RBP31.84■■■□□ 2.69
ZNF550-208ENST00000601415 CECR2Q9BXF3 1484 aa31.79■■■□□ 2.68
ZNF550-208ENST00000601415 NCAPD3P42695 1498 aa30.94■■■□□ 2.54
ZNF550-208ENST00000601415 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.53
ZNF550-208ENST00000601415 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
ZNF550-208ENST00000601415 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
ZNF550-208ENST00000601415 BAZ1AQ9NRL2 1556 aaPredicted RBP30.8■■■□□ 2.52
ZNF550-208ENST00000601415 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
ZNF550-208ENST00000601415 BAZ1BQ9UIG0 1483 aaKnown RBP30.64■■■□□ 2.5
ZNF550-208ENST00000601415 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
ZNF550-208ENST00000601415 ERCC6Q03468 1493 aa30.56■■■□□ 2.48
ZNF550-208ENST00000601415 PEG3Q9GZU2 1588 aa30.52■■■□□ 2.48
ZNF550-208ENST00000601415 NESP48681 1621 aa30.38■■■□□ 2.45
ZNF550-208ENST00000601415 CUX2O14529 1486 aa30.31■■■□□ 2.44
ZNF550-208ENST00000601415 WIZO95785 1651 aa30.22■■■□□ 2.43
ZNF550-208ENST00000601415 LAMC3Q9Y6N6 1575 aa30.19■■■□□ 2.42
ZNF550-208ENST00000601415 PDS5BQ9NTI5 1447 aa30.12■■■□□ 2.41
ZNF550-208ENST00000601415 DNAJC5Q9H3Z4 198 aa30.1■■■□□ 2.41
ZNF550-208ENST00000601415 CADPSQ9ULU8 1353 aa30.08■■■□□ 2.41
ZNF550-208ENST00000601415 RSF1Q96T23 1441 aaPredicted RBP30.07■■■□□ 2.4
ZNF550-208ENST00000601415 KIF21AQ7Z4S6 1674 aa29.93■■■□□ 2.38
ZNF550-208ENST00000601415 THOC2Q8NI27 1593 aaKnown RBP29.91■■■□□ 2.38
ZNF550-208ENST00000601415 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
ZNF550-208ENST00000601415 MRC2Q9UBG0 1479 aa29.77■■■□□ 2.36
ZNF550-208ENST00000601415 CFTRP13569 1480 aa29.72■■■□□ 2.35
ZNF550-208ENST00000601415 CEP164Q9UPV0 1460 aa29.72■■■□□ 2.35
ZNF550-208ENST00000601415 FANCD2Q9BXW9 1451 aa29.71■■■□□ 2.35
ZNF550-208ENST00000601415 WDR62O43379 1518 aa29.61■■■□□ 2.33
ZNF550-208ENST00000601415 CCDC88BA6NC98 1476 aa29.56■■■□□ 2.32
ZNF550-208ENST00000601415 URB2Q14146 1524 aaKnown RBP29.39■■■□□ 2.3
ZNF550-208ENST00000601415 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
ZNF550-208ENST00000601415 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
ZNF550-208ENST00000601415 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
ZNF550-208ENST00000601415 TOPBP1Q92547 1522 aa29.15■■■□□ 2.26
ZNF550-208ENST00000601415 OSCARQ8IYS5 282 aa29.14■■■□□ 2.26
ZNF550-208ENST00000601415 IFT140Q96RY7 1462 aa29.12■■■□□ 2.25
ZNF550-208ENST00000601415 DNMBPQ6XZF7 1577 aa29.04■■■□□ 2.24
ZNF550-208ENST00000601415 ZNF608Q9ULD9 1512 aaPredicted RBP29.01■■■□□ 2.23
ZNF550-208ENST00000601415 TRIM41Q8WV44 630 aa29■■■□□ 2.23
ZNF550-208ENST00000601415 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
ZNF550-208ENST00000601415 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.21
ZNF550-208ENST00000601415 SOGA1O94964 1423 aa28.83■■■□□ 2.21
ZNF550-208ENST00000601415 EIF4G3O43432 1585 aaKnown RBP28.81■■■□□ 2.2
ZNF550-208ENST00000601415 TARBP1Q13395 1621 aaKnown RBP28.8■■■□□ 2.2
ZNF550-208ENST00000601415 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
ZNF550-208ENST00000601415 FBLN2P98095 1184 aa28.78■■■□□ 2.2
ZNF550-208ENST00000601415 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
ZNF550-208ENST00000601415 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
ZNF550-208ENST00000601415 CUX1P39880 1505 aa28.71■■■□□ 2.19
ZNF550-208ENST00000601415 CHMP7Q8WUX9 453 aaPredicted RBP28.58■■■□□ 2.17
ZNF550-208ENST00000601415 CHD1O14646 1710 aa28.55■■■□□ 2.16
ZNF550-208ENST00000601415 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
ZNF550-208ENST00000601415 RIMBP3CA6NJZ7 1639 aa28.53■■■□□ 2.16
ZNF550-208ENST00000601415 RIMBP3BA6NNM3 1639 aa28.53■■■□□ 2.16
ZNF550-208ENST00000601415 RIMBP3Q9UFD9 1639 aa28.53■■■□□ 2.16
ZNF550-208ENST00000601415 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
ZNF550-208ENST00000601415 GRIN2BQ13224 1484 aa28.51■■■□□ 2.15
ZNF550-208ENST00000601415 ARHGEF11O15085 1522 aa28.49■■■□□ 2.15
ZNF550-208ENST00000601415 CYB5RLQ6IPT4 315 aa28.45■■■□□ 2.14
ZNF550-208ENST00000601415 GAPVD1Q14C86 1478 aa28.45■■■□□ 2.14
ZNF550-208ENST00000601415 MAGI1Q96QZ7 1491 aaPredicted RBP28.45■■■□□ 2.14
ZNF550-208ENST00000601415 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
ZNF550-208ENST00000601415 ABCA10Q8WWZ4 1543 aa28.4■■■□□ 2.14
ZNF550-208ENST00000601415 SYNJ2O15056 1496 aa28.36■■■□□ 2.13
ZNF550-208ENST00000601415 SYNJ1O43426 1573 aa28.32■■■□□ 2.12
ZNF550-208ENST00000601415 TOP2BQ02880 1626 aa28.31■■■□□ 2.12
ZNF550-208ENST00000601415 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
ZNF550-208ENST00000601415 BIVM-ERCC5R4GMW8 1640 aa28.27■■■□□ 2.12
ZNF550-208ENST00000601415 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.11
ZNF550-208ENST00000601415 ARAP1Q96P48 1450 aa28.21■■■□□ 2.11
ZNF550-208ENST00000601415 CLASP1Q7Z460 1538 aa28.21■■■□□ 2.11
ZNF550-208ENST00000601415 TRHP20396 242 aaPredicted RBP28.13■■■□□ 2.09
ZNF550-208ENST00000601415 GRIN2AQ12879 1464 aa28.1■■■□□ 2.09
ZNF550-208ENST00000601415 FHAD1B1AJZ9 1412 aa28.09■■■□□ 2.09
ZNF550-208ENST00000601415 ADAMTS12P58397 1594 aa28.05■■■□□ 2.08
ZNF550-208ENST00000601415 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
ZNF550-208ENST00000601415 NUP160Q12769 1436 aa27.97■■■□□ 2.07
ZNF550-208ENST00000601415 CEP170Q5SW79 1584 aa27.94■■■□□ 2.06
ZNF550-208ENST00000601415 KIF27Q86VH2 1401 aa27.89■■■□□ 2.06
ZNF550-208ENST00000601415 JPH4Q96JJ6 628 aa27.86■■■□□ 2.05
ZNF550-208ENST00000601415 IGF1RP08069 1367 aa27.83■■■□□ 2.05
ZNF550-208ENST00000601415 ERCC6L2Q5T890 1561 aa27.82■■■□□ 2.04
ZNF550-208ENST00000601415 PRG4Q92954 1404 aaPredicted RBP27.78■■■□□ 2.04
ZNF550-208ENST00000601415 SHROOM2Q13796 1616 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms