RNA–Protein interactions for RNA: ENST00000375120.3

OTUD3-201, Transcript of OTU deubiquitinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene OTUD3, Length 6,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3-201ENST00000375120 DCAF8L2P0C7V8 631 aa26.15■■□□□ 1.78
OTUD3-201ENST00000375120 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
OTUD3-201ENST00000375120 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
OTUD3-201ENST00000375120 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
OTUD3-201ENST00000375120 PELP1Q8IZL8 1130 aaKnown RBP24.76■■□□□ 1.55
OTUD3-201ENST00000375120 EHMT2Q96KQ7 1210 aa24.75■■□□□ 1.55
OTUD3-201ENST00000375120 PCGF6Q9BYE7 350 aa24.53■■□□□ 1.52
OTUD3-201ENST00000375120 CENPBP07199 599 aaPredicted RBP24.12■■□□□ 1.45
OTUD3-201ENST00000375120 FAM9AQ8IZU1 332 aaPredicted RBP24.11■■□□□ 1.45
OTUD3-201ENST00000375120 APLP2Q06481 763 aa24.07■■□□□ 1.44
OTUD3-201ENST00000375120 TTBK1Q5TCY1 1321 aaPredicted RBP24.03■■□□□ 1.44
OTUD3-201ENST00000375120 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
OTUD3-201ENST00000375120 MYT1Q01538 1121 aa23.82■■□□□ 1.4
OTUD3-201ENST00000375120 ERICH6Q7L0X2 663 aa23.82■■□□□ 1.4
OTUD3-201ENST00000375120 CCER1Q8TC90 406 aaPredicted RBP23.82■■□□□ 1.4
OTUD3-201ENST00000375120 YTHDC1Q96MU7 727 aaKnown RBP23.62■■□□□ 1.37
OTUD3-201ENST00000375120 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
OTUD3-201ENST00000375120 HRCP23327 699 aa23.55■■□□□ 1.36
OTUD3-201ENST00000375120 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
OTUD3-201ENST00000375120 NEFLP07196 543 aa23.36■■□□□ 1.33
OTUD3-201ENST00000375120 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.33
OTUD3-201ENST00000375120 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
OTUD3-201ENST00000375120 UBTFP17480 764 aaKnown RBP23.2■■□□□ 1.3
OTUD3-201ENST00000375120 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
OTUD3-201ENST00000375120 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
OTUD3-201ENST00000375120 CHIC1Q5VXU3 224 aa22.9■■□□□ 1.26
OTUD3-201ENST00000375120 DIEXFQ68CQ4 756 aaKnown RBP22.71■■□□□ 1.23
OTUD3-201ENST00000375120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.66■■□□□ 1.22
OTUD3-201ENST00000375120 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
OTUD3-201ENST00000375120 ITGAEP38570 1179 aa22.61■■□□□ 1.21
OTUD3-201ENST00000375120 DAXXQ9UER7 740 aaPredicted RBP22.59■■□□□ 1.21
OTUD3-201ENST00000375120 GTF3C3Q9Y5Q9 886 aa22.55■■□□□ 1.2
OTUD3-201ENST00000375120 POLR3GLQ9BT43 218 aa22.44■■□□□ 1.18
OTUD3-201ENST00000375120 RTL5Q5HYW3 569 aaPredicted RBP22.38■■□□□ 1.17
OTUD3-201ENST00000375120 CNGB1Q14028 1251 aaPredicted RBP22.36■■□□□ 1.17
OTUD3-201ENST00000375120 BCANQ96GW7 911 aa22.3■■□□□ 1.16
OTUD3-201ENST00000375120 ACIN1Q9UKV3 1341 aaKnown RBP22.23■■□□□ 1.15
OTUD3-201ENST00000375120 ZNF316A6NFI3 1004 aaPredicted RBP22.14■■□□□ 1.13
OTUD3-201ENST00000375120 CLSPNQ9HAW4 1339 aa22.02■■□□□ 1.12
OTUD3-201ENST00000375120 CDK11AQ9UQ88 783 aaPredicted RBP22.01■■□□□ 1.11
OTUD3-201ENST00000375120 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
OTUD3-201ENST00000375120 FAM50AQ14320 339 aaKnown RBP21.94■■□□□ 1.1
OTUD3-201ENST00000375120 ANP32CO43423 234 aa21.92■■□□□ 1.1
OTUD3-201ENST00000375120 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
OTUD3-201ENST00000375120 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
OTUD3-201ENST00000375120 SLC4A1APQ9BWU0 796 aaKnown RBP21.74■■□□□ 1.07
OTUD3-201ENST00000375120 SCAF1Q9H7N4 1312 aaKnown RBP21.72■■□□□ 1.07
OTUD3-201ENST00000375120 FKBP8Q14318 412 aa21.64■■□□□ 1.06
OTUD3-201ENST00000375120 ANP32AP39687 249 aaKnown RBP21.64■■□□□ 1.05
OTUD3-201ENST00000375120 ZNF326Q5BKZ1 582 aaKnown RBP21.61■■□□□ 1.05
OTUD3-201ENST00000375120 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
OTUD3-201ENST00000375120 NPM2Q86SE8 214 aaKnown RBP21.54■■□□□ 1.04
OTUD3-201ENST00000375120 EIF5BO60841 1220 aaKnown RBP21.49■■□□□ 1.03
OTUD3-201ENST00000375120 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
OTUD3-201ENST00000375120 CANXP27824 592 aaKnown RBP21.39■■□□□ 1.02
OTUD3-201ENST00000375120 HNRNPUQ00839 825 aaKnown RBP eCLIP21.37■■□□□ 1.01
OTUD3-201ENST00000375120 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
OTUD3-201ENST00000375120 MIER1Q8N108 512 aa21.33■■□□□ 1.01
OTUD3-201ENST00000375120 ZBTB47Q9UFB7 747 aaPredicted RBP21.32■■□□□ 1
OTUD3-201ENST00000375120 NBR1Q14596 966 aa21.32■■□□□ 1
OTUD3-201ENST00000375120 BCL11AQ9H165 835 aa21.29■■□□□ 1
OTUD3-201ENST00000375120 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
OTUD3-201ENST00000375120 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
OTUD3-201ENST00000375120 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
OTUD3-201ENST00000375120 TONSLQ96HA7 1378 aa21.2■□□□□ 0.98
OTUD3-201ENST00000375120 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
OTUD3-201ENST00000375120 IRX6P78412 446 aaPredicted RBP21.13■□□□□ 0.97
OTUD3-201ENST00000375120 ANP32EQ9BTT0 268 aa21.11■□□□□ 0.97
OTUD3-201ENST00000375120 GLIPR1L2Q4G1C9 344 aa21.11■□□□□ 0.97
OTUD3-201ENST00000375120 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
OTUD3-201ENST00000375120 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
OTUD3-201ENST00000375120 ANP32BQ92688 251 aaKnown RBP21.09■□□□□ 0.97
OTUD3-201ENST00000375120 ABCC9O60706 1549 aa21.08■□□□□ 0.96
OTUD3-201ENST00000375120 SALL2Q9Y467 1007 aaPredicted RBP21.06■□□□□ 0.96
OTUD3-201ENST00000375120 UPF2Q9HAU5 1272 aaKnown RBP21.03■□□□□ 0.96
OTUD3-201ENST00000375120 HSP90AA1P07900 732 aaKnown RBP21.02■□□□□ 0.96
OTUD3-201ENST00000375120 NEFMP07197 916 aa21■□□□□ 0.95
OTUD3-201ENST00000375120 ARXQ96QS3 562 aa21■□□□□ 0.95
OTUD3-201ENST00000375120 MRS2Q9HD23 443 aa20.99■□□□□ 0.95
OTUD3-201ENST00000375120 HIRIP3Q9BW71 556 aaPredicted RBP20.97■□□□□ 0.95
OTUD3-201ENST00000375120 ZNF777Q9ULD5 760 aaPredicted RBP20.97■□□□□ 0.95
OTUD3-201ENST00000375120 TMC1Q8TDI8 760 aa20.95■□□□□ 0.94
OTUD3-201ENST00000375120 SLC24A1O60721 1099 aa20.95■□□□□ 0.94
OTUD3-201ENST00000375120 FBLN2P98095 1184 aa20.89■□□□□ 0.93
OTUD3-201ENST00000375120 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
OTUD3-201ENST00000375120 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.83■□□□□ 0.93
OTUD3-201ENST00000375120 CHIC2Q9UKJ5 165 aa20.82■□□□□ 0.92
OTUD3-201ENST00000375120 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
OTUD3-201ENST00000375120 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
OTUD3-201ENST00000375120 DDRGK1Q96HY6 314 aa20.74■□□□□ 0.91
OTUD3-201ENST00000375120 CLIP1P30622 1438 aa20.73■□□□□ 0.91
OTUD3-201ENST00000375120 WDR43Q15061 677 aaKnown RBP eCLIP20.73■□□□□ 0.91
OTUD3-201ENST00000375120 EIF4G2P78344 907 aaKnown RBP eCLIP20.71■□□□□ 0.91
OTUD3-201ENST00000375120 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
OTUD3-201ENST00000375120 RTN4Q9NQC3 1192 aaKnown RBP20.68■□□□□ 0.9
OTUD3-201ENST00000375120 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
OTUD3-201ENST00000375120 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
OTUD3-201ENST00000375120 KDM2AQ9Y2K7 1162 aa20.65■□□□□ 0.9
OTUD3-201ENST00000375120 BECN1Q14457 450 aa20.63■□□□□ 0.89
OTUD3-201ENST00000375120 NOP58Q9Y2X3 529 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms