Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 AC098850.1-201ENST00000419919 790 ntBASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 AC092658.1-201ENST00000505836 891 ntBASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 AC009090.5-201ENST00000624886 2285 ntBASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 AC119751.2-201ENST00000504529 210 ntBASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 SDHAP3-202ENST00000515467 728 ntBASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 AC074044.1-201ENST00000609673 707 ntBASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 AL033527.4-201ENST00000641026 673 ntBASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB1Q9Y5F3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms