RNA–Protein interactions for RNA: ENST00000376386.3

PRAF2-201, Transcript of PRA1 domain family member 2, humanhuman

TSL 2 BASIC

Gene PRAF2, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-201ENST00000376386 NISCHQ9Y2I1 1504 aa38.2■■■■□ 3.71
PRAF2-201ENST00000376386 ABCC9O60706 1549 aa34.58■■■■□ 3.13
PRAF2-201ENST00000376386 CCDC180Q9P1Z9 1646 aa34.29■■■■□ 3.08
PRAF2-201ENST00000376386 RB1CC1Q8TDY2 1594 aa32.77■■■□□ 2.84
PRAF2-201ENST00000376386 DNAJC5BQ9UF47 199 aa32.64■■■□□ 2.82
PRAF2-201ENST00000376386 NACADO15069 1562 aa32.49■■■□□ 2.79
PRAF2-201ENST00000376386 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
PRAF2-201ENST00000376386 PABPN1Q86U42 306 aaKnown RBP eCLIP32.22■■■□□ 2.75
PRAF2-201ENST00000376386 UNC13AQ9UPW8 1703 aa32.02■■■□□ 2.72
PRAF2-201ENST00000376386 MYO15BQ96JP2 1530 aa31.96■■■□□ 2.71
PRAF2-201ENST00000376386 BICRAQ9NZM4 1560 aa31.83■■■□□ 2.69
PRAF2-201ENST00000376386 ZCCHC6Q5VYS8 1495 aaKnown RBP31.6■■■□□ 2.65
PRAF2-201ENST00000376386 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
PRAF2-201ENST00000376386 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
PRAF2-201ENST00000376386 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
PRAF2-201ENST00000376386 CC2D2AQ9P2K1 1620 aa31.19■■■□□ 2.58
PRAF2-201ENST00000376386 CECR2Q9BXF3 1484 aa31.15■■■□□ 2.58
PRAF2-201ENST00000376386 EIF4G1Q04637 1599 aaKnown RBP31.07■■■□□ 2.56
PRAF2-201ENST00000376386 DNAJC5Q9H3Z4 198 aa30.07■■■□□ 2.4
PRAF2-201ENST00000376386 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
PRAF2-201ENST00000376386 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
PRAF2-201ENST00000376386 ERCC6Q03468 1493 aa29.86■■■□□ 2.37
PRAF2-201ENST00000376386 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
PRAF2-201ENST00000376386 CUX2O14529 1486 aa29.82■■■□□ 2.36
PRAF2-201ENST00000376386 SMARCA2P51531 1590 aa29.8■■■□□ 2.36
PRAF2-201ENST00000376386 HMGXB3Q12766 1538 aa29.76■■■□□ 2.35
PRAF2-201ENST00000376386 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
PRAF2-201ENST00000376386 NESP48681 1621 aa29.65■■■□□ 2.34
PRAF2-201ENST00000376386 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
PRAF2-201ENST00000376386 PEG3Q9GZU2 1588 aa29.51■■■□□ 2.31
PRAF2-201ENST00000376386 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.31
PRAF2-201ENST00000376386 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
PRAF2-201ENST00000376386 THOC2Q8NI27 1593 aaKnown RBP29.32■■■□□ 2.28
PRAF2-201ENST00000376386 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
PRAF2-201ENST00000376386 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
PRAF2-201ENST00000376386 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
PRAF2-201ENST00000376386 WIZO95785 1651 aa29.08■■■□□ 2.25
PRAF2-201ENST00000376386 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
PRAF2-201ENST00000376386 WDR62O43379 1518 aa28.89■■■□□ 2.21
PRAF2-201ENST00000376386 CEP164Q9UPV0 1460 aa28.83■■■□□ 2.21
PRAF2-201ENST00000376386 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
PRAF2-201ENST00000376386 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
PRAF2-201ENST00000376386 CFTRP13569 1480 aa28.74■■■□□ 2.19
PRAF2-201ENST00000376386 TRIM41Q8WV44 630 aa28.73■■■□□ 2.19
PRAF2-201ENST00000376386 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
PRAF2-201ENST00000376386 URB2Q14146 1524 aaKnown RBP28.57■■■□□ 2.16
PRAF2-201ENST00000376386 OSCARQ8IYS5 282 aa28.51■■■□□ 2.15
PRAF2-201ENST00000376386 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
PRAF2-201ENST00000376386 PRDM2Q13029 1718 aa28.37■■■□□ 2.13
PRAF2-201ENST00000376386 ZNF608Q9ULD9 1512 aaPredicted RBP28.27■■■□□ 2.12
PRAF2-201ENST00000376386 IFT140Q96RY7 1462 aa28.26■■■□□ 2.11
PRAF2-201ENST00000376386 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
PRAF2-201ENST00000376386 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
PRAF2-201ENST00000376386 RIMBP3CA6NJZ7 1639 aa28.09■■■□□ 2.09
PRAF2-201ENST00000376386 RIMBP3BA6NNM3 1639 aa28.09■■■□□ 2.09
PRAF2-201ENST00000376386 RIMBP3Q9UFD9 1639 aa28.09■■■□□ 2.09
PRAF2-201ENST00000376386 DNMBPQ6XZF7 1577 aa28.08■■■□□ 2.09
PRAF2-201ENST00000376386 EIF4G3O43432 1585 aaKnown RBP28.05■■■□□ 2.08
PRAF2-201ENST00000376386 AQRO60306 1485 aaKnown RBP eCLIP28.01■■■□□ 2.07
PRAF2-201ENST00000376386 ARHGEF11O15085 1522 aa28■■■□□ 2.07
PRAF2-201ENST00000376386 TARBP1Q13395 1621 aaKnown RBP27.96■■■□□ 2.07
PRAF2-201ENST00000376386 POLA1P09884 1462 aaPredicted RBP27.93■■■□□ 2.06
PRAF2-201ENST00000376386 FBLN2P98095 1184 aa27.91■■■□□ 2.06
PRAF2-201ENST00000376386 CYB5RLQ6IPT4 315 aa27.88■■■□□ 2.05
PRAF2-201ENST00000376386 CHD1O14646 1710 aa27.87■■■□□ 2.05
PRAF2-201ENST00000376386 RAD54L2Q9Y4B4 1467 aa27.86■■■□□ 2.05
PRAF2-201ENST00000376386 SOGA1O94964 1423 aa27.83■■■□□ 2.05
PRAF2-201ENST00000376386 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
PRAF2-201ENST00000376386 FGD5Q6ZNL6 1462 aa27.73■■■□□ 2.03
PRAF2-201ENST00000376386 ARAP1Q96P48 1450 aa27.71■■■□□ 2.03
PRAF2-201ENST00000376386 SNAPC4Q5SXM2 1469 aa27.68■■■□□ 2.02
PRAF2-201ENST00000376386 CUX1P39880 1505 aa27.67■■■□□ 2.02
PRAF2-201ENST00000376386 TRHP20396 242 aaPredicted RBP27.64■■■□□ 2.02
PRAF2-201ENST00000376386 CHMP7Q8WUX9 453 aaPredicted RBP27.64■■■□□ 2.02
PRAF2-201ENST00000376386 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
PRAF2-201ENST00000376386 GRIN2BQ13224 1484 aa27.57■■■□□ 2
PRAF2-201ENST00000376386 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
PRAF2-201ENST00000376386 CLASP1Q7Z460 1538 aa27.55■■■□□ 2
PRAF2-201ENST00000376386 SYNJ1O43426 1573 aa27.52■■■□□ 2
PRAF2-201ENST00000376386 SYNJ2O15056 1496 aa27.5■■□□□ 1.99
PRAF2-201ENST00000376386 SUPT5HO00267 1087 aaKnown RBP27.47■■□□□ 1.99
PRAF2-201ENST00000376386 GAPVD1Q14C86 1478 aa27.46■■□□□ 1.99
PRAF2-201ENST00000376386 PBRM1Q86U86 1689 aa27.41■■□□□ 1.98
PRAF2-201ENST00000376386 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.98
PRAF2-201ENST00000376386 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
PRAF2-201ENST00000376386 WRNQ14191 1432 aaPredicted RBP eCLIP27.26■■□□□ 1.95
PRAF2-201ENST00000376386 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
PRAF2-201ENST00000376386 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
PRAF2-201ENST00000376386 ADAMTS12P58397 1594 aa27.15■■□□□ 1.94
PRAF2-201ENST00000376386 ERCC6L2Q5T890 1561 aa27.15■■□□□ 1.94
PRAF2-201ENST00000376386 BIVM-ERCC5R4GMW8 1640 aa27.14■■□□□ 1.94
PRAF2-201ENST00000376386 NUP160Q12769 1436 aa27.13■■□□□ 1.93
PRAF2-201ENST00000376386 CEP170Q5SW79 1584 aa27.12■■□□□ 1.93
PRAF2-201ENST00000376386 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
PRAF2-201ENST00000376386 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
PRAF2-201ENST00000376386 SHROOM2Q13796 1616 aa26.99■■□□□ 1.91
PRAF2-201ENST00000376386 AEBP2Q6ZN18 517 aaPredicted RBP26.95■■□□□ 1.9
PRAF2-201ENST00000376386 PRG4Q92954 1404 aaPredicted RBP26.92■■□□□ 1.9
PRAF2-201ENST00000376386 JPH4Q96JJ6 628 aa26.91■■□□□ 1.9
PRAF2-201ENST00000376386 RUSC2Q8N2Y8 1516 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms