RNA–Protein interactions for RNA: ENST00000613087.4

IFNL3-202, Transcript of interferon lambda 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IFNL3, Length 734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNL3-202ENST00000613087 NISCHQ9Y2I1 1504 aa38.21■■■■□ 3.71
IFNL3-202ENST00000613087 CCDC180Q9P1Z9 1646 aa34.27■■■■□ 3.08
IFNL3-202ENST00000613087 ABCC9O60706 1549 aa34.25■■■■□ 3.07
IFNL3-202ENST00000613087 RB1CC1Q8TDY2 1594 aa32.61■■■□□ 2.81
IFNL3-202ENST00000613087 NACADO15069 1562 aa32.37■■■□□ 2.77
IFNL3-202ENST00000613087 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
IFNL3-202ENST00000613087 DNAJC5BQ9UF47 199 aa32.05■■■□□ 2.72
IFNL3-202ENST00000613087 UNC13AQ9UPW8 1703 aa31.92■■■□□ 2.7
IFNL3-202ENST00000613087 PABPN1Q86U42 306 aaKnown RBP eCLIP31.91■■■□□ 2.7
IFNL3-202ENST00000613087 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
IFNL3-202ENST00000613087 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
IFNL3-202ENST00000613087 BICRAQ9NZM4 1560 aa31.63■■■□□ 2.65
IFNL3-202ENST00000613087 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
IFNL3-202ENST00000613087 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
IFNL3-202ENST00000613087 SHROOM4Q9ULL8 1493 aa31.16■■■□□ 2.58
IFNL3-202ENST00000613087 CC2D2AQ9P2K1 1620 aa30.94■■■□□ 2.54
IFNL3-202ENST00000613087 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
IFNL3-202ENST00000613087 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.53
IFNL3-202ENST00000613087 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
IFNL3-202ENST00000613087 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
IFNL3-202ENST00000613087 ATAD2BQ9ULI0 1458 aa29.8■■■□□ 2.36
IFNL3-202ENST00000613087 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
IFNL3-202ENST00000613087 BAZ1AQ9NRL2 1556 aaPredicted RBP29.67■■■□□ 2.34
IFNL3-202ENST00000613087 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
IFNL3-202ENST00000613087 ERCC6Q03468 1493 aa29.58■■■□□ 2.33
IFNL3-202ENST00000613087 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
IFNL3-202ENST00000613087 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
IFNL3-202ENST00000613087 MROH2BQ7Z745 1585 aa29.46■■■□□ 2.31
IFNL3-202ENST00000613087 CUX2O14529 1486 aa29.44■■■□□ 2.3
IFNL3-202ENST00000613087 NESP48681 1621 aa29.43■■■□□ 2.3
IFNL3-202ENST00000613087 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
IFNL3-202ENST00000613087 LAMC3Q9Y6N6 1575 aa29.22■■■□□ 2.27
IFNL3-202ENST00000613087 WIZO95785 1651 aa29.15■■■□□ 2.26
IFNL3-202ENST00000613087 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
IFNL3-202ENST00000613087 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
IFNL3-202ENST00000613087 PDS5BQ9NTI5 1447 aa29.05■■■□□ 2.24
IFNL3-202ENST00000613087 CADPSQ9ULU8 1353 aa28.99■■■□□ 2.23
IFNL3-202ENST00000613087 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
IFNL3-202ENST00000613087 MRC2Q9UBG0 1479 aa28.79■■■□□ 2.2
IFNL3-202ENST00000613087 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
IFNL3-202ENST00000613087 WDR62O43379 1518 aa28.7■■■□□ 2.19
IFNL3-202ENST00000613087 CEP164Q9UPV0 1460 aa28.7■■■□□ 2.18
IFNL3-202ENST00000613087 FANCD2Q9BXW9 1451 aa28.67■■■□□ 2.18
IFNL3-202ENST00000613087 CFTRP13569 1480 aa28.66■■■□□ 2.18
IFNL3-202ENST00000613087 PRDM2Q13029 1718 aa28.45■■■□□ 2.14
IFNL3-202ENST00000613087 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
IFNL3-202ENST00000613087 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
IFNL3-202ENST00000613087 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
IFNL3-202ENST00000613087 OSCARQ8IYS5 282 aa28.16■■■□□ 2.1
IFNL3-202ENST00000613087 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
IFNL3-202ENST00000613087 IFT140Q96RY7 1462 aa28.11■■■□□ 2.09
IFNL3-202ENST00000613087 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.08
IFNL3-202ENST00000613087 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
IFNL3-202ENST00000613087 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
IFNL3-202ENST00000613087 EIF4G3O43432 1585 aaKnown RBP27.93■■■□□ 2.06
IFNL3-202ENST00000613087 TARBP1Q13395 1621 aaKnown RBP27.88■■■□□ 2.05
IFNL3-202ENST00000613087 AQRO60306 1485 aaKnown RBP eCLIP27.84■■■□□ 2.05
IFNL3-202ENST00000613087 POLA1P09884 1462 aaPredicted RBP27.84■■■□□ 2.05
IFNL3-202ENST00000613087 RIMBP3CA6NJZ7 1639 aa27.79■■■□□ 2.04
IFNL3-202ENST00000613087 RIMBP3BA6NNM3 1639 aa27.79■■■□□ 2.04
IFNL3-202ENST00000613087 RIMBP3Q9UFD9 1639 aa27.79■■■□□ 2.04
IFNL3-202ENST00000613087 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.04
IFNL3-202ENST00000613087 CHD1O14646 1710 aa27.75■■■□□ 2.03
IFNL3-202ENST00000613087 SOGA1O94964 1423 aa27.75■■■□□ 2.03
IFNL3-202ENST00000613087 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
IFNL3-202ENST00000613087 FBLN2P98095 1184 aa27.71■■■□□ 2.03
IFNL3-202ENST00000613087 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
IFNL3-202ENST00000613087 TDRD9Q8NDG6 1382 aaKnown RBP27.69■■■□□ 2.02
IFNL3-202ENST00000613087 ARHGEF11O15085 1522 aa27.68■■■□□ 2.02
IFNL3-202ENST00000613087 CUX1P39880 1505 aa27.67■■■□□ 2.02
IFNL3-202ENST00000613087 WDR97A6NE52 1622 aa27.57■■■□□ 2
IFNL3-202ENST00000613087 SNAPC4Q5SXM2 1469 aa27.55■■■□□ 2
IFNL3-202ENST00000613087 CYB5RLQ6IPT4 315 aa27.52■■■□□ 2
IFNL3-202ENST00000613087 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
IFNL3-202ENST00000613087 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
IFNL3-202ENST00000613087 MAGI1Q96QZ7 1491 aaPredicted RBP27.46■■□□□ 1.99
IFNL3-202ENST00000613087 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
IFNL3-202ENST00000613087 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
IFNL3-202ENST00000613087 ARAP1Q96P48 1450 aa27.4■■□□□ 1.98
IFNL3-202ENST00000613087 SYNJ1O43426 1573 aa27.39■■□□□ 1.98
IFNL3-202ENST00000613087 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
IFNL3-202ENST00000613087 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
IFNL3-202ENST00000613087 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
IFNL3-202ENST00000613087 ABCA5Q8WWZ7 1642 aa27.33■■□□□ 1.97
IFNL3-202ENST00000613087 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
IFNL3-202ENST00000613087 TOP2BQ02880 1626 aa27.25■■□□□ 1.95
IFNL3-202ENST00000613087 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
IFNL3-202ENST00000613087 TRHP20396 242 aaPredicted RBP27.24■■□□□ 1.95
IFNL3-202ENST00000613087 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
IFNL3-202ENST00000613087 ADAMTS12P58397 1594 aa27.12■■□□□ 1.93
IFNL3-202ENST00000613087 FHAD1B1AJZ9 1412 aa27.04■■□□□ 1.92
IFNL3-202ENST00000613087 CEP170Q5SW79 1584 aa27.03■■□□□ 1.92
IFNL3-202ENST00000613087 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
IFNL3-202ENST00000613087 NUP160Q12769 1436 aa27■■□□□ 1.91
IFNL3-202ENST00000613087 ERCC6L2Q5T890 1561 aa26.97■■□□□ 1.91
IFNL3-202ENST00000613087 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
IFNL3-202ENST00000613087 PRG4Q92954 1404 aaPredicted RBP26.79■■□□□ 1.88
IFNL3-202ENST00000613087 JPH4Q96JJ6 628 aa26.78■■□□□ 1.88
IFNL3-202ENST00000613087 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
IFNL3-202ENST00000613087 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms