Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCER1Q8TC90 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCER1Q8TC90 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCER1Q8TC90 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCER1Q8TC90 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCER1Q8TC90 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCER1Q8TC90 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCER1Q8TC90 MIR574-201ENST00000385209 96 ntBASIC23.29■■□□□ 1.32
CCER1Q8TC90 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 AC026396.1-201ENST00000419388 421 ntBASIC23.29■■□□□ 1.32
CCER1Q8TC90 AL353705.2-201ENST00000428243 662 ntBASIC23.29■■□□□ 1.32
CCER1Q8TC90 AC005237.2-201ENST00000434368 219 ntBASIC23.29■■□□□ 1.32
CCER1Q8TC90 MKNK2P1-201ENST00000437526 628 ntBASIC23.29■■□□□ 1.32
CCER1Q8TC90 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 AC055717.3-201ENST00000622967 595 ntBASIC23.29■■□□□ 1.32
CCER1Q8TC90 AC105339.1-204ENST00000636249 355 ntBASIC23.29■■□□□ 1.32
CCER1Q8TC90 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 GRN-214ENST00000589265 1632 ntTSL 5 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCER1Q8TC90 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCER1Q8TC90 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CCER1Q8TC90 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 AC084364.1-201ENST00000551967 1556 ntBASIC23.28■■□□□ 1.32
CCER1Q8TC90 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 RBM39-205ENST00000397370 612 ntTSL 2 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 HIST3H2BA-201ENST00000436555 524 ntBASIC23.28■■□□□ 1.32
CCER1Q8TC90 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 KRT18P58-201ENST00000527480 1120 ntBASIC23.28■■□□□ 1.32
CCER1Q8TC90 PUS1-205ENST00000535067 838 ntTSL 3 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCER1Q8TC90 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC23.28■■□□□ 1.32
CCER1Q8TC90 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 MROH4P-201ENST00000431302 1578 ntBASIC23.27■■□□□ 1.32
CCER1Q8TC90 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 CEND1P1-201ENST00000451006 455 ntBASIC23.27■■□□□ 1.32
CCER1Q8TC90 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 MTDHP5-201ENST00000598980 586 ntBASIC23.27■■□□□ 1.32
CCER1Q8TC90 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 ELL2P1-201ENST00000413990 1906 ntBASIC23.27■■□□□ 1.32
CCER1Q8TC90 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC23.27■■□□□ 1.32
CCER1Q8TC90 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCER1Q8TC90 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CCER1Q8TC90 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms