RNA–Protein interactions for RNA: ENST00000546017.5

GABARAPL1-218, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2 BASIC

Gene GABARAPL1, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-218ENST00000546017 NISCHQ9Y2I1 1504 aa33.59■■■□□ 2.97
GABARAPL1-218ENST00000546017 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
GABARAPL1-218ENST00000546017 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
GABARAPL1-218ENST00000546017 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
GABARAPL1-218ENST00000546017 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
GABARAPL1-218ENST00000546017 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
GABARAPL1-218ENST00000546017 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.95
GABARAPL1-218ENST00000546017 ABCC9O60706 1549 aa27.16■■□□□ 1.94
GABARAPL1-218ENST00000546017 NACADO15069 1562 aa26.99■■□□□ 1.91
GABARAPL1-218ENST00000546017 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
GABARAPL1-218ENST00000546017 SCRIBQ14160 1630 aa26.85■■□□□ 1.89
GABARAPL1-218ENST00000546017 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
GABARAPL1-218ENST00000546017 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
GABARAPL1-218ENST00000546017 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.77
GABARAPL1-218ENST00000546017 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
GABARAPL1-218ENST00000546017 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
GABARAPL1-218ENST00000546017 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
GABARAPL1-218ENST00000546017 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
GABARAPL1-218ENST00000546017 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
GABARAPL1-218ENST00000546017 WIZO95785 1651 aa25.78■■□□□ 1.72
GABARAPL1-218ENST00000546017 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
GABARAPL1-218ENST00000546017 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
GABARAPL1-218ENST00000546017 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
GABARAPL1-218ENST00000546017 PEG3Q9GZU2 1588 aa25.37■■□□□ 1.65
GABARAPL1-218ENST00000546017 TRIM41Q8WV44 630 aa25.33■■□□□ 1.65
GABARAPL1-218ENST00000546017 SMARCA2P51531 1590 aa25.29■■□□□ 1.64
GABARAPL1-218ENST00000546017 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
GABARAPL1-218ENST00000546017 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
GABARAPL1-218ENST00000546017 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
GABARAPL1-218ENST00000546017 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
GABARAPL1-218ENST00000546017 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
GABARAPL1-218ENST00000546017 HMGXB3Q12766 1538 aa24.92■■□□□ 1.58
GABARAPL1-218ENST00000546017 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
GABARAPL1-218ENST00000546017 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
GABARAPL1-218ENST00000546017 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.57
GABARAPL1-218ENST00000546017 WRNQ14191 1432 aaPredicted RBP eCLIP24.72■■□□□ 1.55
GABARAPL1-218ENST00000546017 EEA1Q15075 1411 aa24.61■■□□□ 1.53
GABARAPL1-218ENST00000546017 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
GABARAPL1-218ENST00000546017 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
GABARAPL1-218ENST00000546017 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
GABARAPL1-218ENST00000546017 SOGA1O94964 1423 aa24.53■■□□□ 1.52
GABARAPL1-218ENST00000546017 CFTRP13569 1480 aa24.48■■□□□ 1.51
GABARAPL1-218ENST00000546017 CSRNP3Q8WYN3 585 aa24.43■■□□□ 1.5
GABARAPL1-218ENST00000546017 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
GABARAPL1-218ENST00000546017 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.5
GABARAPL1-218ENST00000546017 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
GABARAPL1-218ENST00000546017 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
GABARAPL1-218ENST00000546017 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
GABARAPL1-218ENST00000546017 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
GABARAPL1-218ENST00000546017 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
GABARAPL1-218ENST00000546017 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
GABARAPL1-218ENST00000546017 TRIM26Q12899 539 aaPredicted RBP24.28■■□□□ 1.48
GABARAPL1-218ENST00000546017 CUX1P39880 1505 aa24.25■■□□□ 1.47
GABARAPL1-218ENST00000546017 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
GABARAPL1-218ENST00000546017 KIF21BO75037 1637 aa24.22■■□□□ 1.47
GABARAPL1-218ENST00000546017 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
GABARAPL1-218ENST00000546017 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
GABARAPL1-218ENST00000546017 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
GABARAPL1-218ENST00000546017 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
GABARAPL1-218ENST00000546017 HRCP23327 699 aa24.02■■□□□ 1.44
GABARAPL1-218ENST00000546017 RAPGEF2Q9Y4G8 1499 aa24.01■■□□□ 1.43
GABARAPL1-218ENST00000546017 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
GABARAPL1-218ENST00000546017 ERICH3Q5RHP9 1530 aa23.99■■□□□ 1.43
GABARAPL1-218ENST00000546017 PRXQ9BXM0 1461 aa23.97■■□□□ 1.43
GABARAPL1-218ENST00000546017 NESP48681 1621 aa23.96■■□□□ 1.43
GABARAPL1-218ENST00000546017 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
GABARAPL1-218ENST00000546017 CLIP1P30622 1438 aa23.92■■□□□ 1.42
GABARAPL1-218ENST00000546017 DNMBPQ6XZF7 1577 aa23.92■■□□□ 1.42
GABARAPL1-218ENST00000546017 CUX2O14529 1486 aa23.9■■□□□ 1.42
GABARAPL1-218ENST00000546017 PPARGC1BQ86YN6 1023 aaKnown RBP23.86■■□□□ 1.41
GABARAPL1-218ENST00000546017 PDS5BQ9NTI5 1447 aa23.85■■□□□ 1.41
GABARAPL1-218ENST00000546017 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
GABARAPL1-218ENST00000546017 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
GABARAPL1-218ENST00000546017 IGF1RP08069 1367 aa23.77■■□□□ 1.39
GABARAPL1-218ENST00000546017 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
GABARAPL1-218ENST00000546017 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
GABARAPL1-218ENST00000546017 ABCA10Q8WWZ4 1543 aa23.73■■□□□ 1.39
GABARAPL1-218ENST00000546017 URB2Q14146 1524 aaKnown RBP23.72■■□□□ 1.39
GABARAPL1-218ENST00000546017 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
GABARAPL1-218ENST00000546017 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
GABARAPL1-218ENST00000546017 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
GABARAPL1-218ENST00000546017 KIF21AQ7Z4S6 1674 aa23.66■■□□□ 1.38
GABARAPL1-218ENST00000546017 APLP2Q06481 763 aa23.64■■□□□ 1.37
GABARAPL1-218ENST00000546017 TTBK1Q5TCY1 1321 aaPredicted RBP23.62■■□□□ 1.37
GABARAPL1-218ENST00000546017 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
GABARAPL1-218ENST00000546017 ZEB1P37275 1124 aaPredicted RBP23.58■■□□□ 1.36
GABARAPL1-218ENST00000546017 WDR97A6NE52 1622 aa23.57■■□□□ 1.36
GABARAPL1-218ENST00000546017 CUL7Q14999 1698 aa23.56■■□□□ 1.36
GABARAPL1-218ENST00000546017 ARHGAP35Q9NRY4 1499 aa23.51■■□□□ 1.35
GABARAPL1-218ENST00000546017 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
GABARAPL1-218ENST00000546017 ABCA5Q8WWZ7 1642 aa23.49■■□□□ 1.35
GABARAPL1-218ENST00000546017 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
GABARAPL1-218ENST00000546017 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
GABARAPL1-218ENST00000546017 TARBP1Q13395 1621 aaKnown RBP23.42■■□□□ 1.34
GABARAPL1-218ENST00000546017 CTTNBP2Q8WZ74 1663 aa23.34■■□□□ 1.33
GABARAPL1-218ENST00000546017 WDR62O43379 1518 aa23.33■■□□□ 1.32
GABARAPL1-218ENST00000546017 EFCAB5A4FU69 1503 aa23.32■■□□□ 1.32
GABARAPL1-218ENST00000546017 FHAD1B1AJZ9 1412 aa23.3■■□□□ 1.32
GABARAPL1-218ENST00000546017 ERCC6Q03468 1493 aa23.3■■□□□ 1.32
GABARAPL1-218ENST00000546017 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms