RNA–Protein interactions for RNA: ENST00000357898.3

SPSB1-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPSB1, Length 1,439 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-202ENST00000357898 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
SPSB1-202ENST00000357898 CCDC180Q9P1Z9 1646 aa36.69■■■■□ 3.46
SPSB1-202ENST00000357898 ABCC9O60706 1549 aa36.51■■■■□ 3.44
SPSB1-202ENST00000357898 RB1CC1Q8TDY2 1594 aa34.85■■■■□ 3.17
SPSB1-202ENST00000357898 DCAF8L2P0C7V8 631 aa34.79■■■■□ 3.16
SPSB1-202ENST00000357898 NACADO15069 1562 aa34.67■■■■□ 3.14
SPSB1-202ENST00000357898 MYO15BQ96JP2 1530 aa34.23■■■■□ 3.07
SPSB1-202ENST00000357898 PABPN1Q86U42 306 aaKnown RBP eCLIP34.1■■■■□ 3.05
SPSB1-202ENST00000357898 ZCCHC6Q5VYS8 1495 aaKnown RBP34.08■■■■□ 3.05
SPSB1-202ENST00000357898 UNC13AQ9UPW8 1703 aa33.98■■■■□ 3.03
SPSB1-202ENST00000357898 DNAJC5BQ9UF47 199 aa33.96■■■■□ 3.03
SPSB1-202ENST00000357898 DCAF1Q9Y4B6 1507 aa33.91■■■■□ 3.02
SPSB1-202ENST00000357898 BICRAQ9NZM4 1560 aa33.74■■■□□ 2.99
SPSB1-202ENST00000357898 SCRIBQ14160 1630 aa33.53■■■□□ 2.96
SPSB1-202ENST00000357898 SHROOM4Q9ULL8 1493 aa33.34■■■□□ 2.93
SPSB1-202ENST00000357898 CC2D2AQ9P2K1 1620 aa32.95■■■□□ 2.87
SPSB1-202ENST00000357898 EIF4G1Q04637 1599 aaKnown RBP32.94■■■□□ 2.86
SPSB1-202ENST00000357898 CECR2Q9BXF3 1484 aa32.85■■■□□ 2.85
SPSB1-202ENST00000357898 NCAPD3P42695 1498 aa32■■■□□ 2.71
SPSB1-202ENST00000357898 SMARCA4P51532 1647 aa31.97■■■□□ 2.71
SPSB1-202ENST00000357898 ATAD2BQ9ULI0 1458 aa31.95■■■□□ 2.71
SPSB1-202ENST00000357898 SMARCA2P51531 1590 aa31.89■■■□□ 2.7
SPSB1-202ENST00000357898 BAZ1AQ9NRL2 1556 aaPredicted RBP31.88■■■□□ 2.69
SPSB1-202ENST00000357898 HMGXB3Q12766 1538 aa31.76■■■□□ 2.68
SPSB1-202ENST00000357898 BAZ1BQ9UIG0 1483 aaKnown RBP31.69■■■□□ 2.66
SPSB1-202ENST00000357898 MROH2BQ7Z745 1585 aa31.65■■■□□ 2.66
SPSB1-202ENST00000357898 PEG3Q9GZU2 1588 aa31.62■■■□□ 2.65
SPSB1-202ENST00000357898 ERCC6Q03468 1493 aa31.56■■■□□ 2.64
SPSB1-202ENST00000357898 NESP48681 1621 aa31.41■■■□□ 2.62
SPSB1-202ENST00000357898 CUX2O14529 1486 aa31.32■■■□□ 2.6
SPSB1-202ENST00000357898 WIZO95785 1651 aa31.3■■■□□ 2.6
SPSB1-202ENST00000357898 LAMC3Q9Y6N6 1575 aa31.24■■■□□ 2.59
SPSB1-202ENST00000357898 RSF1Q96T23 1441 aaPredicted RBP31.12■■■□□ 2.57
SPSB1-202ENST00000357898 PDS5BQ9NTI5 1447 aa31.12■■■□□ 2.57
SPSB1-202ENST00000357898 CADPSQ9ULU8 1353 aa31.09■■■□□ 2.57
SPSB1-202ENST00000357898 DNAJC5Q9H3Z4 198 aa31.01■■■□□ 2.55
SPSB1-202ENST00000357898 KIF21AQ7Z4S6 1674 aa30.99■■■□□ 2.55
SPSB1-202ENST00000357898 THOC2Q8NI27 1593 aaKnown RBP30.97■■■□□ 2.55
SPSB1-202ENST00000357898 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
SPSB1-202ENST00000357898 MRC2Q9UBG0 1479 aa30.78■■■□□ 2.52
SPSB1-202ENST00000357898 CFTRP13569 1480 aa30.74■■■□□ 2.51
SPSB1-202ENST00000357898 CEP164Q9UPV0 1460 aa30.74■■■□□ 2.51
SPSB1-202ENST00000357898 FANCD2Q9BXW9 1451 aa30.72■■■□□ 2.51
SPSB1-202ENST00000357898 WDR62O43379 1518 aa30.65■■■□□ 2.5
SPSB1-202ENST00000357898 CCDC88BA6NC98 1476 aa30.6■■■□□ 2.49
SPSB1-202ENST00000357898 PRDM2Q13029 1718 aa30.43■■■□□ 2.46
SPSB1-202ENST00000357898 URB2Q14146 1524 aaKnown RBP30.41■■■□□ 2.46
SPSB1-202ENST00000357898 TOPBP1Q92547 1522 aa30.15■■■□□ 2.42
SPSB1-202ENST00000357898 ABCC8Q09428 1581 aa30.15■■■□□ 2.42
SPSB1-202ENST00000357898 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
SPSB1-202ENST00000357898 IFT140Q96RY7 1462 aa30.11■■■□□ 2.41
SPSB1-202ENST00000357898 DNMBPQ6XZF7 1577 aa30.06■■■□□ 2.4
SPSB1-202ENST00000357898 OSCARQ8IYS5 282 aa30.05■■■□□ 2.4
SPSB1-202ENST00000357898 ZNF608Q9ULD9 1512 aaPredicted RBP30■■■□□ 2.39
SPSB1-202ENST00000357898 TRIM41Q8WV44 630 aa29.88■■■□□ 2.37
SPSB1-202ENST00000357898 POLA1P09884 1462 aaPredicted RBP29.85■■■□□ 2.37
SPSB1-202ENST00000357898 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
SPSB1-202ENST00000357898 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
SPSB1-202ENST00000357898 AQRO60306 1485 aaKnown RBP eCLIP29.81■■■□□ 2.36
SPSB1-202ENST00000357898 SOGA1O94964 1423 aa29.8■■■□□ 2.36
SPSB1-202ENST00000357898 RAD54L2Q9Y4B4 1467 aa29.77■■■□□ 2.36
SPSB1-202ENST00000357898 FGD5Q6ZNL6 1462 aa29.73■■■□□ 2.35
SPSB1-202ENST00000357898 CUX1P39880 1505 aa29.72■■■□□ 2.35
SPSB1-202ENST00000357898 FBLN2P98095 1184 aa29.7■■■□□ 2.34
SPSB1-202ENST00000357898 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
SPSB1-202ENST00000357898 CHD1O14646 1710 aa29.56■■■□□ 2.32
SPSB1-202ENST00000357898 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
SPSB1-202ENST00000357898 RIMBP3CA6NJZ7 1639 aa29.51■■■□□ 2.31
SPSB1-202ENST00000357898 RIMBP3BA6NNM3 1639 aa29.51■■■□□ 2.31
SPSB1-202ENST00000357898 RIMBP3Q9UFD9 1639 aa29.51■■■□□ 2.31
SPSB1-202ENST00000357898 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
SPSB1-202ENST00000357898 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
SPSB1-202ENST00000357898 GRIN2BQ13224 1484 aa29.47■■■□□ 2.31
SPSB1-202ENST00000357898 ARHGEF11O15085 1522 aa29.45■■■□□ 2.31
SPSB1-202ENST00000357898 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
SPSB1-202ENST00000357898 GAPVD1Q14C86 1478 aa29.41■■■□□ 2.3
SPSB1-202ENST00000357898 WRNQ14191 1432 aaPredicted RBP eCLIP29.4■■■□□ 2.3
SPSB1-202ENST00000357898 ABCA10Q8WWZ4 1543 aa29.39■■■□□ 2.3
SPSB1-202ENST00000357898 CYB5RLQ6IPT4 315 aa29.35■■■□□ 2.29
SPSB1-202ENST00000357898 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
SPSB1-202ENST00000357898 PBRM1Q86U86 1689 aa29.33■■■□□ 2.29
SPSB1-202ENST00000357898 TOP2BQ02880 1626 aa29.32■■■□□ 2.28
SPSB1-202ENST00000357898 BIVM-ERCC5R4GMW8 1640 aa29.3■■■□□ 2.28
SPSB1-202ENST00000357898 SYNJ1O43426 1573 aa29.29■■■□□ 2.28
SPSB1-202ENST00000357898 ABCA5Q8WWZ7 1642 aa29.28■■■□□ 2.28
SPSB1-202ENST00000357898 CLASP1Q7Z460 1538 aa29.2■■■□□ 2.26
SPSB1-202ENST00000357898 ARAP1Q96P48 1450 aa29.17■■■□□ 2.26
SPSB1-202ENST00000357898 GRIN2AQ12879 1464 aa29.07■■■□□ 2.24
SPSB1-202ENST00000357898 FHAD1B1AJZ9 1412 aa29.05■■■□□ 2.24
SPSB1-202ENST00000357898 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
SPSB1-202ENST00000357898 ERICH3Q5RHP9 1530 aa29.03■■■□□ 2.24
SPSB1-202ENST00000357898 TRHP20396 242 aaPredicted RBP28.98■■■□□ 2.23
SPSB1-202ENST00000357898 NUP160Q12769 1436 aa28.93■■■□□ 2.22
SPSB1-202ENST00000357898 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
SPSB1-202ENST00000357898 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
SPSB1-202ENST00000357898 ERCC6L2Q5T890 1561 aa28.78■■■□□ 2.2
SPSB1-202ENST00000357898 IGF1RP08069 1367 aa28.76■■■□□ 2.2
SPSB1-202ENST00000357898 JPH4Q96JJ6 628 aa28.76■■■□□ 2.19
SPSB1-202ENST00000357898 SHROOM2Q13796 1616 aa28.74■■■□□ 2.19
SPSB1-202ENST00000357898 PRG4Q92954 1404 aaPredicted RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms