RNA–Protein interactions for RNA: ENST00000381291.8

ITSN1-205, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,437 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-205ENST00000381291 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
ITSN1-205ENST00000381291 NISCHQ9Y2I1 1504 aa25.74■■□□□ 1.71
ITSN1-205ENST00000381291 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
ITSN1-205ENST00000381291 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
ITSN1-205ENST00000381291 EHMT2Q96KQ7 1210 aa25.03■■□□□ 1.6
ITSN1-205ENST00000381291 APLP2Q06481 763 aa24.41■■□□□ 1.5
ITSN1-205ENST00000381291 FAM9AQ8IZU1 332 aaPredicted RBP24.32■■□□□ 1.48
ITSN1-205ENST00000381291 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
ITSN1-205ENST00000381291 RANGAP1P46060 587 aaPredicted RBP24.04■■□□□ 1.44
ITSN1-205ENST00000381291 ATP1B4Q9UN42 357 aaPredicted RBP23.84■■□□□ 1.41
ITSN1-205ENST00000381291 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
ITSN1-205ENST00000381291 PCGF6Q9BYE7 350 aa23.6■■□□□ 1.37
ITSN1-205ENST00000381291 PELP1Q8IZL8 1130 aaKnown RBP23.59■■□□□ 1.37
ITSN1-205ENST00000381291 UBTFP17480 764 aaKnown RBP23.59■■□□□ 1.37
ITSN1-205ENST00000381291 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
ITSN1-205ENST00000381291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.29
ITSN1-205ENST00000381291 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.29
ITSN1-205ENST00000381291 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
ITSN1-205ENST00000381291 MYT1LQ9UL68 1186 aa23.07■■□□□ 1.28
ITSN1-205ENST00000381291 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
ITSN1-205ENST00000381291 ITGAEP38570 1179 aa22.87■■□□□ 1.25
ITSN1-205ENST00000381291 CENPBP07199 599 aaPredicted RBP22.84■■□□□ 1.25
ITSN1-205ENST00000381291 PABPN1Q86U42 306 aaKnown RBP eCLIP22.8■■□□□ 1.24
ITSN1-205ENST00000381291 ABCC9O60706 1549 aa22.78■■□□□ 1.24
ITSN1-205ENST00000381291 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
ITSN1-205ENST00000381291 ERICH6Q7L0X2 663 aa22.66■■□□□ 1.22
ITSN1-205ENST00000381291 YTHDC1Q96MU7 727 aaKnown RBP22.65■■□□□ 1.22
ITSN1-205ENST00000381291 POLR3GLQ9BT43 218 aa22.65■■□□□ 1.22
ITSN1-205ENST00000381291 NEFLP07196 543 aa22.59■■□□□ 1.21
ITSN1-205ENST00000381291 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.21
ITSN1-205ENST00000381291 TRIM26Q12899 539 aaPredicted RBP22.49■■□□□ 1.19
ITSN1-205ENST00000381291 CNGB1Q14028 1251 aaPredicted RBP22.45■■□□□ 1.18
ITSN1-205ENST00000381291 FBLN2P98095 1184 aa22.35■■□□□ 1.17
ITSN1-205ENST00000381291 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
ITSN1-205ENST00000381291 FAM50AQ14320 339 aaKnown RBP22.25■■□□□ 1.15
ITSN1-205ENST00000381291 TRIM52Q96A61 297 aa22.14■■□□□ 1.14
ITSN1-205ENST00000381291 HRCP23327 699 aa22.08■■□□□ 1.12
ITSN1-205ENST00000381291 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
ITSN1-205ENST00000381291 DAXXQ9UER7 740 aaPredicted RBP21.94■■□□□ 1.1
ITSN1-205ENST00000381291 NEUROD1Q13562 356 aa21.94■■□□□ 1.1
ITSN1-205ENST00000381291 P3H3Q8IVL6 736 aa21.92■■□□□ 1.1
ITSN1-205ENST00000381291 ZNF326Q5BKZ1 582 aaKnown RBP21.92■■□□□ 1.1
ITSN1-205ENST00000381291 BCANQ96GW7 911 aa21.79■■□□□ 1.08
ITSN1-205ENST00000381291 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
ITSN1-205ENST00000381291 CLSPNQ9HAW4 1339 aa21.7■■□□□ 1.06
ITSN1-205ENST00000381291 CSRNP3Q8WYN3 585 aa21.68■■□□□ 1.06
ITSN1-205ENST00000381291 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
ITSN1-205ENST00000381291 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
ITSN1-205ENST00000381291 ESF1Q9H501 851 aaKnown RBP21.6■■□□□ 1.05
ITSN1-205ENST00000381291 SLC24A1O60721 1099 aa21.6■■□□□ 1.05
ITSN1-205ENST00000381291 CDK11AQ9UQ88 783 aaPredicted RBP21.6■■□□□ 1.05
ITSN1-205ENST00000381291 PLPPR3Q6T4P5 718 aa21.58■■□□□ 1.04
ITSN1-205ENST00000381291 NPM1P06748 294 aaKnown RBP eCLIP21.55■■□□□ 1.04
ITSN1-205ENST00000381291 ANP32CO43423 234 aa21.47■■□□□ 1.03
ITSN1-205ENST00000381291 CHGAP10645 457 aaKnown RBP21.45■■□□□ 1.02
ITSN1-205ENST00000381291 STAG3Q9UJ98 1225 aa21.43■■□□□ 1.02
ITSN1-205ENST00000381291 ZNF316A6NFI3 1004 aaPredicted RBP21.42■■□□□ 1.02
ITSN1-205ENST00000381291 BCL11AQ9H165 835 aa21.42■■□□□ 1.02
ITSN1-205ENST00000381291 NEFMP07197 916 aa21.4■■□□□ 1.02
ITSN1-205ENST00000381291 ZBTB47Q9UFB7 747 aaPredicted RBP21.4■■□□□ 1.02
ITSN1-205ENST00000381291 MYT1Q01538 1121 aa21.38■■□□□ 1.01
ITSN1-205ENST00000381291 CANXP27824 592 aaKnown RBP21.31■■□□□ 1
ITSN1-205ENST00000381291 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
ITSN1-205ENST00000381291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.25■□□□□ 0.991e-6■■■■□ 23.9
ITSN1-205ENST00000381291 CHIC2Q9UKJ5 165 aa21.22■□□□□ 0.99
ITSN1-205ENST00000381291 RTL5Q5HYW3 569 aaPredicted RBP21.19■□□□□ 0.98
ITSN1-205ENST00000381291 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
ITSN1-205ENST00000381291 TSPY4P0CV99 314 aa21.13■□□□□ 0.97
ITSN1-205ENST00000381291 TSPY10P0CW01 314 aa21.13■□□□□ 0.97
ITSN1-205ENST00000381291 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
ITSN1-205ENST00000381291 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
ITSN1-205ENST00000381291 MTUS2Q5JR59 1369 aa21.03■□□□□ 0.96
ITSN1-205ENST00000381291 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
ITSN1-205ENST00000381291 KDM2AQ9Y2K7 1162 aa20.99■□□□□ 0.95
ITSN1-205ENST00000381291 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
ITSN1-205ENST00000381291 RB1CC1Q8TDY2 1594 aa20.97■□□□□ 0.95
ITSN1-205ENST00000381291 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
ITSN1-205ENST00000381291 SALL2Q9Y467 1007 aaPredicted RBP20.91■□□□□ 0.94
ITSN1-205ENST00000381291 PLEKHG5O94827 1062 aa20.9■□□□□ 0.94
ITSN1-205ENST00000381291 PLEKHD1A6NEE1 506 aa20.9■□□□□ 0.94
ITSN1-205ENST00000381291 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
ITSN1-205ENST00000381291 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
ITSN1-205ENST00000381291 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
ITSN1-205ENST00000381291 A0A0G2JS52 829 aa20.86■□□□□ 0.93
ITSN1-205ENST00000381291 PPP1R15AO75807 674 aaPredicted RBP20.86■□□□□ 0.93
ITSN1-205ENST00000381291 RRP7BPQ9NSQ0 103 aa20.85■□□□□ 0.93
ITSN1-205ENST00000381291 ARID4BQ4LE39 1312 aaPredicted RBP20.85■□□□□ 0.93
ITSN1-205ENST00000381291 C14orf37Q86TY3 774 aa20.81■□□□□ 0.92
ITSN1-205ENST00000381291 CLIP1P30622 1438 aa20.81■□□□□ 0.92
ITSN1-205ENST00000381291 HNRNPUQ00839 825 aaKnown RBP eCLIP20.8■□□□□ 0.92
ITSN1-205ENST00000381291 ZBTB7CA1YPR0 619 aa20.79■□□□□ 0.92
ITSN1-205ENST00000381291 TMC1Q8TDI8 760 aa20.79■□□□□ 0.92
ITSN1-205ENST00000381291 ERCC6Q03468 1493 aa20.77■□□□□ 0.91
ITSN1-205ENST00000381291 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
ITSN1-205ENST00000381291 NPM2Q86SE8 214 aaKnown RBP20.73■□□□□ 0.91
ITSN1-205ENST00000381291 WDR43Q15061 677 aaKnown RBP eCLIP20.73■□□□□ 0.91
ITSN1-205ENST00000381291 RGL3Q3MIN7 710 aa20.73■□□□□ 0.91
ITSN1-205ENST00000381291 CFDP1Q9UEE9 299 aaPredicted RBP20.7■□□□□ 0.9
ITSN1-205ENST00000381291 HIRIP3Q9BW71 556 aaPredicted RBP20.7■□□□□ 0.9
ITSN1-205ENST00000381291 RSF1Q96T23 1441 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms