RNA–Protein interactions for RNA: ENST00000581850.1

LINC00473-203, long intergenic non-protein coding RNA 473, humanhuman

TSL 3 BASIC

Gene LINC00473, Length 929 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-203ENST00000581850 NISCHQ9Y2I1 1504 aa39.44■■■■□ 3.9
LINC00473-203ENST00000581850 CCDC180Q9P1Z9 1646 aa35.07■■■■□ 3.21
LINC00473-203ENST00000581850 ABCC9O60706 1549 aa34.1■■■■□ 3.05
LINC00473-203ENST00000581850 ZCCHC6Q5VYS8 1495 aaKnown RBP32.91■■■□□ 2.86
LINC00473-203ENST00000581850 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
LINC00473-203ENST00000581850 NACADO15069 1562 aa32.86■■■□□ 2.85
LINC00473-203ENST00000581850 DCAF8L2P0C7V8 631 aa32.71■■■□□ 2.83
LINC00473-203ENST00000581850 MYO15BQ96JP2 1530 aa32.7■■■□□ 2.83
LINC00473-203ENST00000581850 DCAF1Q9Y4B6 1507 aa32.63■■■□□ 2.81
LINC00473-203ENST00000581850 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
LINC00473-203ENST00000581850 SCRIBQ14160 1630 aa32■■■□□ 2.71
LINC00473-203ENST00000581850 BICRAQ9NZM4 1560 aa31.97■■■□□ 2.71
LINC00473-203ENST00000581850 PABPN1Q86U42 306 aaKnown RBP eCLIP31.83■■■□□ 2.69
LINC00473-203ENST00000581850 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
LINC00473-203ENST00000581850 DNAJC5BQ9UF47 199 aa31.17■■■□□ 2.58
LINC00473-203ENST00000581850 EIF4G1Q04637 1599 aaKnown RBP31.06■■■□□ 2.56
LINC00473-203ENST00000581850 CC2D2AQ9P2K1 1620 aa30.91■■■□□ 2.54
LINC00473-203ENST00000581850 CECR2Q9BXF3 1484 aa30.73■■■□□ 2.51
LINC00473-203ENST00000581850 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
LINC00473-203ENST00000581850 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
LINC00473-203ENST00000581850 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
LINC00473-203ENST00000581850 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
LINC00473-203ENST00000581850 SMARCA2P51531 1590 aa30.31■■■□□ 2.44
LINC00473-203ENST00000581850 PEG3Q9GZU2 1588 aa30.31■■■□□ 2.44
LINC00473-203ENST00000581850 NCAPD3P42695 1498 aa30.29■■■□□ 2.44
LINC00473-203ENST00000581850 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
LINC00473-203ENST00000581850 WIZO95785 1651 aa30.15■■■□□ 2.42
LINC00473-203ENST00000581850 BAZ1BQ9UIG0 1483 aaKnown RBP30.1■■■□□ 2.41
LINC00473-203ENST00000581850 RSF1Q96T23 1441 aaPredicted RBP30.07■■■□□ 2.4
LINC00473-203ENST00000581850 TOP2AP11388 1531 aaKnown RBP29.78■■■□□ 2.36
LINC00473-203ENST00000581850 NESP48681 1621 aa29.6■■■□□ 2.33
LINC00473-203ENST00000581850 LAMC3Q9Y6N6 1575 aa29.52■■■□□ 2.32
LINC00473-203ENST00000581850 CCDC88BA6NC98 1476 aa29.41■■■□□ 2.3
LINC00473-203ENST00000581850 CADPSQ9ULU8 1353 aa29.39■■■□□ 2.29
LINC00473-203ENST00000581850 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
LINC00473-203ENST00000581850 ERCC6Q03468 1493 aa29.32■■■□□ 2.28
LINC00473-203ENST00000581850 SUPT5HO00267 1087 aaKnown RBP29.3■■■□□ 2.28
LINC00473-203ENST00000581850 CFTRP13569 1480 aa29.29■■■□□ 2.28
LINC00473-203ENST00000581850 PRDM2Q13029 1718 aa29.25■■■□□ 2.27
LINC00473-203ENST00000581850 PDS5BQ9NTI5 1447 aa29.21■■■□□ 2.27
LINC00473-203ENST00000581850 THOC2Q8NI27 1593 aaKnown RBP29.19■■■□□ 2.26
LINC00473-203ENST00000581850 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
LINC00473-203ENST00000581850 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
LINC00473-203ENST00000581850 CUX2O14529 1486 aa29■■■□□ 2.23
LINC00473-203ENST00000581850 MRC2Q9UBG0 1479 aa28.98■■■□□ 2.23
LINC00473-203ENST00000581850 WDR62O43379 1518 aa28.93■■■□□ 2.22
LINC00473-203ENST00000581850 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
LINC00473-203ENST00000581850 DNAJC5Q9H3Z4 198 aa28.73■■■□□ 2.19
LINC00473-203ENST00000581850 TOPBP1Q92547 1522 aa28.67■■■□□ 2.18
LINC00473-203ENST00000581850 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
LINC00473-203ENST00000581850 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
LINC00473-203ENST00000581850 CUX1P39880 1505 aa28.53■■■□□ 2.16
LINC00473-203ENST00000581850 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
LINC00473-203ENST00000581850 TARBP1Q13395 1621 aaKnown RBP28.41■■■□□ 2.14
LINC00473-203ENST00000581850 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
LINC00473-203ENST00000581850 FGD5Q6ZNL6 1462 aa28.39■■■□□ 2.13
LINC00473-203ENST00000581850 BIVM-ERCC5R4GMW8 1640 aa28.37■■■□□ 2.13
LINC00473-203ENST00000581850 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
LINC00473-203ENST00000581850 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
LINC00473-203ENST00000581850 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
LINC00473-203ENST00000581850 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
LINC00473-203ENST00000581850 RAD54L2Q9Y4B4 1467 aa28.31■■■□□ 2.12
LINC00473-203ENST00000581850 WDR97A6NE52 1622 aa28.29■■■□□ 2.12
LINC00473-203ENST00000581850 EIF4G3O43432 1585 aaKnown RBP28.28■■■□□ 2.12
LINC00473-203ENST00000581850 SOGA1O94964 1423 aa28.25■■■□□ 2.11
LINC00473-203ENST00000581850 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.1
LINC00473-203ENST00000581850 ABCA10Q8WWZ4 1543 aa28.11■■■□□ 2.09
LINC00473-203ENST00000581850 TDRD9Q8NDG6 1382 aaKnown RBP28.09■■■□□ 2.09
LINC00473-203ENST00000581850 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
LINC00473-203ENST00000581850 PBRM1Q86U86 1689 aa28.04■■■□□ 2.08
LINC00473-203ENST00000581850 GAPVD1Q14C86 1478 aa27.95■■■□□ 2.07
LINC00473-203ENST00000581850 CHD1O14646 1710 aa27.94■■■□□ 2.06
LINC00473-203ENST00000581850 GRIN2BQ13224 1484 aa27.93■■■□□ 2.06
LINC00473-203ENST00000581850 SNAPC4Q5SXM2 1469 aa27.92■■■□□ 2.06
LINC00473-203ENST00000581850 MAGI1Q96QZ7 1491 aaPredicted RBP27.85■■■□□ 2.05
LINC00473-203ENST00000581850 ADAMTS12P58397 1594 aa27.77■■■□□ 2.04
LINC00473-203ENST00000581850 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
LINC00473-203ENST00000581850 SYNJ2O15056 1496 aa27.74■■■□□ 2.03
LINC00473-203ENST00000581850 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
LINC00473-203ENST00000581850 KIF27Q86VH2 1401 aa27.68■■■□□ 2.02
LINC00473-203ENST00000581850 FBLN2P98095 1184 aa27.67■■■□□ 2.02
LINC00473-203ENST00000581850 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
LINC00473-203ENST00000581850 FHAD1B1AJZ9 1412 aa27.62■■■□□ 2.01
LINC00473-203ENST00000581850 CHMP7Q8WUX9 453 aaPredicted RBP27.61■■■□□ 2.01
LINC00473-203ENST00000581850 GRIN2AQ12879 1464 aa27.6■■■□□ 2.01
LINC00473-203ENST00000581850 RUSC2Q8N2Y8 1516 aa27.59■■■□□ 2.01
LINC00473-203ENST00000581850 CUL7Q14999 1698 aa27.59■■■□□ 2.01
LINC00473-203ENST00000581850 CLASP1Q7Z460 1538 aa27.58■■■□□ 2.01
LINC00473-203ENST00000581850 IGF1RP08069 1367 aa27.58■■■□□ 2.01
LINC00473-203ENST00000581850 CEP170Q5SW79 1584 aa27.52■■■□□ 2
LINC00473-203ENST00000581850 AEBP2Q6ZN18 517 aaPredicted RBP27.48■■□□□ 1.99
LINC00473-203ENST00000581850 NUP160Q12769 1436 aa27.48■■□□□ 1.99
LINC00473-203ENST00000581850 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
LINC00473-203ENST00000581850 RIMBP3CA6NJZ7 1639 aa27.45■■□□□ 1.99
LINC00473-203ENST00000581850 RIMBP3BA6NNM3 1639 aa27.45■■□□□ 1.99
LINC00473-203ENST00000581850 RIMBP3Q9UFD9 1639 aa27.45■■□□□ 1.99
LINC00473-203ENST00000581850 ARHGEF11O15085 1522 aa27.41■■□□□ 1.98
LINC00473-203ENST00000581850 CARMIL1Q5VZK9 1371 aa27.39■■□□□ 1.98
LINC00473-203ENST00000581850 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
LINC00473-203ENST00000581850 RAPGEF2Q9Y4G8 1499 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms