Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 COPE-202ENST00000349893 948 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 FAM220BP-201ENST00000377689 816 ntBASIC10.41□□□□□ -0.74
SCXQ7RTU7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 HLA-V-204ENST00000476601 1289 ntBASIC10.41□□□□□ -0.74
SCXQ7RTU7 SERBP1P5-201ENST00000510079 1181 ntBASIC10.41□□□□□ -0.74
SCXQ7RTU7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 AC009118.2-201ENST00000613275 655 ntBASIC10.41□□□□□ -0.74
SCXQ7RTU7 SPTSSB-204ENST00000617024 1292 ntBASIC10.41□□□□□ -0.74
SCXQ7RTU7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 AL590560.3-201ENST00000623350 461 ntBASIC10.41□□□□□ -0.74
SCXQ7RTU7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 KRT8P39-201ENST00000396270 1433 ntBASIC10.41□□□□□ -0.74
SCXQ7RTU7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC10.41□□□□□ -0.74
SCXQ7RTU7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SCXQ7RTU7 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AC022144.1-201ENST00000602255 1580 ntBASIC10.4□□□□□ -0.74
SCXQ7RTU7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 TSSK5P-201ENST00000423978 907 ntBASIC10.4□□□□□ -0.74
SCXQ7RTU7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms