RNA–Protein interactions for RNA: ENST00000476601.5

HLA-V-204, Transcript of major histocompatibility complex, class I, V (pseudogene), humanhuman

BASIC

Gene HLA-V, Length 1,289 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-V-204ENST00000476601 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.89
HLA-V-204ENST00000476601 CCDC180Q9P1Z9 1646 aa35.03■■■■□ 3.2
HLA-V-204ENST00000476601 ABCC9O60706 1549 aa34.37■■■■□ 3.09
HLA-V-204ENST00000476601 RB1CC1Q8TDY2 1594 aa33.05■■■□□ 2.88
HLA-V-204ENST00000476601 NACADO15069 1562 aa33.02■■■□□ 2.88
HLA-V-204ENST00000476601 MYO15BQ96JP2 1530 aa32.87■■■□□ 2.85
HLA-V-204ENST00000476601 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
HLA-V-204ENST00000476601 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
HLA-V-204ENST00000476601 DCAF1Q9Y4B6 1507 aa32.65■■■□□ 2.82
HLA-V-204ENST00000476601 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
HLA-V-204ENST00000476601 PABPN1Q86U42 306 aaKnown RBP eCLIP32.09■■■□□ 2.73
HLA-V-204ENST00000476601 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
HLA-V-204ENST00000476601 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
HLA-V-204ENST00000476601 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
HLA-V-204ENST00000476601 DNAJC5BQ9UF47 199 aa31.66■■■□□ 2.66
HLA-V-204ENST00000476601 EIF4G1Q04637 1599 aaKnown RBP31.21■■■□□ 2.59
HLA-V-204ENST00000476601 CC2D2AQ9P2K1 1620 aa31.08■■■□□ 2.57
HLA-V-204ENST00000476601 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.54
HLA-V-204ENST00000476601 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
HLA-V-204ENST00000476601 SMARCA4P51532 1647 aa30.54■■■□□ 2.48
HLA-V-204ENST00000476601 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
HLA-V-204ENST00000476601 ATAD2BQ9ULI0 1458 aa30.46■■■□□ 2.47
HLA-V-204ENST00000476601 SMARCA2P51531 1590 aa30.42■■■□□ 2.46
HLA-V-204ENST00000476601 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.44
HLA-V-204ENST00000476601 HMGXB3Q12766 1538 aa30.32■■■□□ 2.44
HLA-V-204ENST00000476601 MROH2BQ7Z745 1585 aa30.3■■■□□ 2.44
HLA-V-204ENST00000476601 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
HLA-V-204ENST00000476601 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
HLA-V-204ENST00000476601 WIZO95785 1651 aa29.9■■■□□ 2.38
HLA-V-204ENST00000476601 NESP48681 1621 aa29.69■■■□□ 2.34
HLA-V-204ENST00000476601 TOP2AP11388 1531 aaKnown RBP29.68■■■□□ 2.34
HLA-V-204ENST00000476601 ERCC6Q03468 1493 aa29.67■■■□□ 2.34
HLA-V-204ENST00000476601 LAMC3Q9Y6N6 1575 aa29.66■■■□□ 2.34
HLA-V-204ENST00000476601 CADPSQ9ULU8 1353 aa29.59■■■□□ 2.33
HLA-V-204ENST00000476601 PDS5BQ9NTI5 1447 aa29.52■■■□□ 2.32
HLA-V-204ENST00000476601 CUX2O14529 1486 aa29.46■■■□□ 2.31
HLA-V-204ENST00000476601 CFTRP13569 1480 aa29.39■■■□□ 2.3
HLA-V-204ENST00000476601 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
HLA-V-204ENST00000476601 THOC2Q8NI27 1593 aaKnown RBP29.29■■■□□ 2.28
HLA-V-204ENST00000476601 KIF21AQ7Z4S6 1674 aa29.26■■■□□ 2.27
HLA-V-204ENST00000476601 FANCD2Q9BXW9 1451 aa29.22■■■□□ 2.27
HLA-V-204ENST00000476601 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
HLA-V-204ENST00000476601 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
HLA-V-204ENST00000476601 WDR62O43379 1518 aa29.1■■■□□ 2.25
HLA-V-204ENST00000476601 SUPT5HO00267 1087 aaKnown RBP29.01■■■□□ 2.23
HLA-V-204ENST00000476601 PRDM2Q13029 1718 aa28.99■■■□□ 2.23
HLA-V-204ENST00000476601 URB2Q14146 1524 aaKnown RBP28.91■■■□□ 2.22
HLA-V-204ENST00000476601 ABCC8Q09428 1581 aa28.78■■■□□ 2.2
HLA-V-204ENST00000476601 TOPBP1Q92547 1522 aa28.73■■■□□ 2.19
HLA-V-204ENST00000476601 DNAJC5Q9H3Z4 198 aa28.69■■■□□ 2.18
HLA-V-204ENST00000476601 DNMBPQ6XZF7 1577 aa28.68■■■□□ 2.18
HLA-V-204ENST00000476601 IFT140Q96RY7 1462 aa28.62■■■□□ 2.17
HLA-V-204ENST00000476601 POLA1P09884 1462 aaPredicted RBP28.48■■■□□ 2.15
HLA-V-204ENST00000476601 CUX1P39880 1505 aa28.44■■■□□ 2.14
HLA-V-204ENST00000476601 ZNF608Q9ULD9 1512 aaPredicted RBP28.43■■■□□ 2.14
HLA-V-204ENST00000476601 TARBP1Q13395 1621 aaKnown RBP28.39■■■□□ 2.13
HLA-V-204ENST00000476601 FGD5Q6ZNL6 1462 aa28.38■■■□□ 2.13
HLA-V-204ENST00000476601 SOGA1O94964 1423 aa28.36■■■□□ 2.13
HLA-V-204ENST00000476601 RAD54L2Q9Y4B4 1467 aa28.32■■■□□ 2.12
HLA-V-204ENST00000476601 EIF4G3O43432 1585 aaKnown RBP28.3■■■□□ 2.12
HLA-V-204ENST00000476601 AQRO60306 1485 aaKnown RBP eCLIP28.26■■■□□ 2.11
HLA-V-204ENST00000476601 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.11
HLA-V-204ENST00000476601 WDR97A6NE52 1622 aa28.25■■■□□ 2.11
HLA-V-204ENST00000476601 OSCARQ8IYS5 282 aa28.2■■■□□ 2.1
HLA-V-204ENST00000476601 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.1
HLA-V-204ENST00000476601 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
HLA-V-204ENST00000476601 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.1
HLA-V-204ENST00000476601 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
HLA-V-204ENST00000476601 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
HLA-V-204ENST00000476601 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
HLA-V-204ENST00000476601 GAPVD1Q14C86 1478 aa28.03■■■□□ 2.08
HLA-V-204ENST00000476601 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
HLA-V-204ENST00000476601 SNAPC4Q5SXM2 1469 aa28.01■■■□□ 2.07
HLA-V-204ENST00000476601 ABCA5Q8WWZ7 1642 aa27.99■■■□□ 2.07
HLA-V-204ENST00000476601 FBLN2P98095 1184 aa27.92■■■□□ 2.06
HLA-V-204ENST00000476601 SYNJ2O15056 1496 aa27.9■■■□□ 2.06
HLA-V-204ENST00000476601 CHD1O14646 1710 aa27.88■■■□□ 2.05
HLA-V-204ENST00000476601 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
HLA-V-204ENST00000476601 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
HLA-V-204ENST00000476601 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
HLA-V-204ENST00000476601 FHAD1B1AJZ9 1412 aa27.74■■■□□ 2.03
HLA-V-204ENST00000476601 ADAMTS12P58397 1594 aa27.73■■■□□ 2.03
HLA-V-204ENST00000476601 ARHGEF11O15085 1522 aa27.71■■■□□ 2.03
HLA-V-204ENST00000476601 CLASP1Q7Z460 1538 aa27.71■■■□□ 2.03
HLA-V-204ENST00000476601 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
HLA-V-204ENST00000476601 GRIN2AQ12879 1464 aa27.69■■■□□ 2.02
HLA-V-204ENST00000476601 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
HLA-V-204ENST00000476601 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
HLA-V-204ENST00000476601 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
HLA-V-204ENST00000476601 NUP160Q12769 1436 aa27.61■■■□□ 2.01
HLA-V-204ENST00000476601 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
HLA-V-204ENST00000476601 IGF1RP08069 1367 aa27.59■■■□□ 2.01
HLA-V-204ENST00000476601 CEP170Q5SW79 1584 aa27.51■■□□□ 1.99
HLA-V-204ENST00000476601 ARAP1Q96P48 1450 aa27.48■■□□□ 1.99
HLA-V-204ENST00000476601 CUL7Q14999 1698 aa27.47■■□□□ 1.99
HLA-V-204ENST00000476601 AEBP2Q6ZN18 517 aaPredicted RBP27.47■■□□□ 1.99
HLA-V-204ENST00000476601 CYB5RLQ6IPT4 315 aa27.44■■□□□ 1.98
HLA-V-204ENST00000476601 CARMIL1Q5VZK9 1371 aa27.41■■□□□ 1.98
HLA-V-204ENST00000476601 SHROOM2Q13796 1616 aa27.35■■□□□ 1.97
HLA-V-204ENST00000476601 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms