RNA–Protein interactions for RNA: ENST00000303757.12

LST1-202, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-202ENST00000303757 AEBP2Q6ZN18 517 aaPredicted RBP44.44■■■■■ 4.7
LST1-202ENST00000303757 CHIC1Q5VXU3 224 aa43.01■■■■■ 4.48
LST1-202ENST00000303757 NISCHQ9Y2I1 1504 aa40.01■■■■□ 3.99
LST1-202ENST00000303757 PHF23Q9BUL5 403 aaPredicted RBP37.83■■■■□ 3.65
LST1-202ENST00000303757 SENP3Q9H4L4 574 aaPredicted RBP37.69■■■■□ 3.62
LST1-202ENST00000303757 ABCC9O60706 1549 aa36.76■■■■□ 3.48
LST1-202ENST00000303757 CCDC180Q9P1Z9 1646 aa36.11■■■■□ 3.37
LST1-202ENST00000303757 FOXD1Q16676 465 aa35.06■■■■□ 3.2
LST1-202ENST00000303757 DNAJC5BQ9UF47 199 aa34.96■■■■□ 3.19
LST1-202ENST00000303757 PLPPR3Q6T4P5 718 aa34.72■■■■□ 3.15
LST1-202ENST00000303757 RB1CC1Q8TDY2 1594 aa34.64■■■■□ 3.14
LST1-202ENST00000303757 NACADO15069 1562 aa34.23■■■■□ 3.07
LST1-202ENST00000303757 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
LST1-202ENST00000303757 PABPN1Q86U42 306 aaKnown RBP eCLIP34.17■■■■□ 3.06
LST1-202ENST00000303757 UNC13AQ9UPW8 1703 aa34■■■■□ 3.03
LST1-202ENST00000303757 BICRAQ9NZM4 1560 aa33.7■■■□□ 2.99
LST1-202ENST00000303757 MYO15BQ96JP2 1530 aa33.48■■■□□ 2.95
LST1-202ENST00000303757 PPP6R1Q9UPN7 881 aa33.48■■■□□ 2.95
LST1-202ENST00000303757 ADRA2BP18089 450 aa33.4■■■□□ 2.94
LST1-202ENST00000303757 CC2D2AQ9P2K1 1620 aa33.14■■■□□ 2.9
LST1-202ENST00000303757 CECR2Q9BXF3 1484 aa33.11■■■□□ 2.89
LST1-202ENST00000303757 ZCCHC6Q5VYS8 1495 aaKnown RBP33.03■■■□□ 2.88
LST1-202ENST00000303757 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
LST1-202ENST00000303757 SHROOM4Q9ULL8 1493 aa32.99■■■□□ 2.87
LST1-202ENST00000303757 PIAS4Q8N2W9 510 aaPredicted RBP32.93■■■□□ 2.86
LST1-202ENST00000303757 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
LST1-202ENST00000303757 EIF4G1Q04637 1599 aaKnown RBP32.9■■■□□ 2.86
LST1-202ENST00000303757 MSH5O43196 834 aa32.42■■■□□ 2.78
LST1-202ENST00000303757 DNAJC5Q9H3Z4 198 aa32.38■■■□□ 2.77
LST1-202ENST00000303757 CUX2O14529 1486 aa31.74■■■□□ 2.67
LST1-202ENST00000303757 ERCC6Q03468 1493 aa31.73■■■□□ 2.67
LST1-202ENST00000303757 NCAPD3P42695 1498 aa31.6■■■□□ 2.65
LST1-202ENST00000303757 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
LST1-202ENST00000303757 NESP48681 1621 aa31.44■■■□□ 2.62
LST1-202ENST00000303757 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
LST1-202ENST00000303757 SMARCA2P51531 1590 aa31.34■■■□□ 2.61
LST1-202ENST00000303757 HMGXB3Q12766 1538 aa31.33■■■□□ 2.61
LST1-202ENST00000303757 BAZ1BQ9UIG0 1483 aaKnown RBP31.18■■■□□ 2.58
LST1-202ENST00000303757 THOC2Q8NI27 1593 aaKnown RBP31.16■■■□□ 2.58
LST1-202ENST00000303757 BAZ1AQ9NRL2 1556 aaPredicted RBP31.07■■■□□ 2.56
LST1-202ENST00000303757 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
LST1-202ENST00000303757 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
LST1-202ENST00000303757 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
LST1-202ENST00000303757 TRIM41Q8WV44 630 aa30.9■■■□□ 2.54
LST1-202ENST00000303757 MROH2BQ7Z745 1585 aa30.88■■■□□ 2.53
LST1-202ENST00000303757 PDS5BQ9NTI5 1447 aa30.83■■■□□ 2.53
LST1-202ENST00000303757 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
LST1-202ENST00000303757 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
LST1-202ENST00000303757 WDR62O43379 1518 aa30.57■■■□□ 2.48
LST1-202ENST00000303757 PPP4R3CPQ6ZMV5 832 aa30.56■■■□□ 2.48
LST1-202ENST00000303757 WIZO95785 1651 aa30.55■■■□□ 2.48
LST1-202ENST00000303757 SCAF1Q9H7N4 1312 aaKnown RBP30.47■■■□□ 2.47
LST1-202ENST00000303757 MAPK8IP2Q13387 824 aaPredicted RBP30.42■■■□□ 2.46
LST1-202ENST00000303757 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
LST1-202ENST00000303757 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
LST1-202ENST00000303757 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
LST1-202ENST00000303757 POTEDQ86YR6 584 aa30.19■■■□□ 2.42
LST1-202ENST00000303757 CFTRP13569 1480 aa30.19■■■□□ 2.42
LST1-202ENST00000303757 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
LST1-202ENST00000303757 DMRT2Q9Y5R5 561 aa30.06■■■□□ 2.4
LST1-202ENST00000303757 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.4
LST1-202ENST00000303757 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
LST1-202ENST00000303757 RIMBP3CA6NJZ7 1639 aa30■■■□□ 2.39
LST1-202ENST00000303757 RIMBP3BA6NNM3 1639 aa30■■■□□ 2.39
LST1-202ENST00000303757 RIMBP3Q9UFD9 1639 aa30■■■□□ 2.39
LST1-202ENST00000303757 PRDM2Q13029 1718 aa29.93■■■□□ 2.38
LST1-202ENST00000303757 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
LST1-202ENST00000303757 ARHGEF11O15085 1522 aa29.81■■■□□ 2.36
LST1-202ENST00000303757 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
LST1-202ENST00000303757 CNKSR2Q8WXI2 1034 aa29.78■■■□□ 2.36
LST1-202ENST00000303757 TOPBP1Q92547 1522 aa29.72■■■□□ 2.35
LST1-202ENST00000303757 CCDC88BA6NC98 1476 aa29.72■■■□□ 2.35
LST1-202ENST00000303757 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
LST1-202ENST00000303757 CYB5RLQ6IPT4 315 aa29.68■■■□□ 2.34
LST1-202ENST00000303757 CHD1O14646 1710 aa29.64■■■□□ 2.34
LST1-202ENST00000303757 NCBP3Q53F19 620 aaKnown RBP29.6■■■□□ 2.33
LST1-202ENST00000303757 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.32
LST1-202ENST00000303757 TRHP20396 242 aaPredicted RBP29.56■■■□□ 2.32
LST1-202ENST00000303757 DNMBPQ6XZF7 1577 aa29.56■■■□□ 2.32
LST1-202ENST00000303757 FBLN2P98095 1184 aa29.53■■■□□ 2.32
LST1-202ENST00000303757 ABCC8Q09428 1581 aa29.52■■■□□ 2.32
LST1-202ENST00000303757 TARBP1Q13395 1621 aaKnown RBP29.49■■■□□ 2.31
LST1-202ENST00000303757 ARAP1Q96P48 1450 aa29.49■■■□□ 2.31
LST1-202ENST00000303757 KCNA4P22459 653 aa29.48■■■□□ 2.31
LST1-202ENST00000303757 POLA1P09884 1462 aaPredicted RBP29.38■■■□□ 2.29
LST1-202ENST00000303757 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
LST1-202ENST00000303757 HOXD11P31277 338 aaPredicted RBP29.31■■■□□ 2.28
LST1-202ENST00000303757 TDRD9Q8NDG6 1382 aaKnown RBP29.3■■■□□ 2.28
LST1-202ENST00000303757 RNF216Q9NWF9 866 aaPredicted RBP29.3■■■□□ 2.28
LST1-202ENST00000303757 NPM3O75607 178 aaKnown RBP29.25■■■□□ 2.27
LST1-202ENST00000303757 SOGA1O94964 1423 aa29.24■■■□□ 2.27
LST1-202ENST00000303757 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
LST1-202ENST00000303757 CLASP1Q7Z460 1538 aa29.17■■■□□ 2.26
LST1-202ENST00000303757 CHMP7Q8WUX9 453 aaPredicted RBP29.15■■■□□ 2.26
LST1-202ENST00000303757 FGD5Q6ZNL6 1462 aa29.15■■■□□ 2.26
LST1-202ENST00000303757 SYNJ1O43426 1573 aa29.11■■■□□ 2.25
LST1-202ENST00000303757 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
LST1-202ENST00000303757 WDR97A6NE52 1622 aa29.04■■■□□ 2.24
LST1-202ENST00000303757 CUX1P39880 1505 aa29.04■■■□□ 2.24
LST1-202ENST00000303757 GRIN2BQ13224 1484 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms