Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.75□□□□□ -0.05
RAE1P78406 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.74□□□□□ -0.05
RAE1P78406 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.74□□□□□ -0.05
RAE1P78406 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.74□□□□□ -0.05
RAE1P78406 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.74□□□□□ -0.05
RAE1P78406 AL589987.1-201ENST00000453380 819 ntBASIC14.74□□□□□ -0.05
RAE1P78406 IGHV3-42-201ENST00000520410 361 ntBASIC14.74□□□□□ -0.05
RAE1P78406 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 AC011467.4-201ENST00000594891 528 ntBASIC14.74□□□□□ -0.05
RAE1P78406 AL391069.4-201ENST00000609583 481 ntBASIC14.74□□□□□ -0.05
RAE1P78406 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RAE1P78406 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RAE1P78406 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RAE1P78406 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 REXO1L4P-201ENST00000605109 1937 ntBASIC14.74□□□□□ -0.05
RAE1P78406 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.74□□□□□ -0.05
RAE1P78406 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RAE1P78406 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 AL359258.3-201ENST00000622910 2331 ntBASIC14.74□□□□□ -0.05
RAE1P78406 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAE1P78406 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.74□□□□□ -0.05
RAE1P78406 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAE1P78406 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RAE1P78406 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.73□□□□□ -0.05
RAE1P78406 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RAE1P78406 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.73□□□□□ -0.05
RAE1P78406 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
RAE1P78406 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.73□□□□□ -0.05
RAE1P78406 AC055876.3-201ENST00000431496 288 ntBASIC14.73□□□□□ -0.05
RAE1P78406 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.73□□□□□ -0.05
RAE1P78406 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.73□□□□□ -0.05
RAE1P78406 AC004890.2-204ENST00000481968 304 ntBASIC14.73□□□□□ -0.05
RAE1P78406 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.73□□□□□ -0.05
RAE1P78406 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.73□□□□□ -0.05
RAE1P78406 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.73□□□□□ -0.05
RAE1P78406 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.73□□□□□ -0.05
RAE1P78406 AL390955.2-201ENST00000603032 514 ntBASIC14.73□□□□□ -0.05
RAE1P78406 AC008738.7-201ENST00000609744 511 ntBASIC14.73□□□□□ -0.05
RAE1P78406 AC138649.4-201ENST00000612222 287 ntBASIC14.73□□□□□ -0.05
RAE1P78406 AL390754.1-201ENST00000619088 582 ntBASIC14.73□□□□□ -0.05
RAE1P78406 AC004840.1-201ENST00000636359 365 ntBASIC14.73□□□□□ -0.05
RAE1P78406 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.73□□□□□ -0.05
RAE1P78406 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAE1P78406 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.73□□□□□ -0.05
RAE1P78406 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms