Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 AC005521.1-201ENST00000393351 872 ntBASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 AC074051.2-201ENST00000565115 352 ntBASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 GGTLC5P-201ENST00000617623 998 ntBASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 CICP8-201ENST00000455800 2813 ntBASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 AC012569.1-201ENST00000591191 1524 ntBASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
SMIM3Q9BZL3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 AP005117.1-201ENST00000584346 1413 ntBASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 POM121L3P-201ENST00000419331 1163 ntBASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 IGHV3-47-201ENST00000425060 335 ntBASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 LINC00265-3P-201ENST00000447588 903 ntBASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 NKAPP1-205ENST00000585790 367 ntBASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 AL365330.1-201ENST00000607459 531 ntBASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 HSPA7-201ENST00000445535 1927 ntBASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM3Q9BZL3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms