RNA–Protein interactions for RNA: ENST00000355192.7

MSRB3-202, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 1 (best) BASIC

Gene MSRB3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-202ENST00000355192 NISCHQ9Y2I1 1504 aa24.75■■□□□ 1.55
MSRB3-202ENST00000355192 DCAF8L2P0C7V8 631 aa23.71■■□□□ 1.39
MSRB3-202ENST00000355192 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
MSRB3-202ENST00000355192 SHROOM4Q9ULL8 1493 aa23.27■■□□□ 1.32
MSRB3-202ENST00000355192 PCGF6Q9BYE7 350 aa22.45■■□□□ 1.18
MSRB3-202ENST00000355192 EHMT2Q96KQ7 1210 aa22.28■■□□□ 1.16
MSRB3-202ENST00000355192 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
MSRB3-202ENST00000355192 HRCP23327 699 aa21.9■■□□□ 1.1
MSRB3-202ENST00000355192 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
MSRB3-202ENST00000355192 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
MSRB3-202ENST00000355192 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
MSRB3-202ENST00000355192 TTBK1Q5TCY1 1321 aaPredicted RBP21.61■■□□□ 1.05
MSRB3-202ENST00000355192 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
MSRB3-202ENST00000355192 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
MSRB3-202ENST00000355192 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.03
MSRB3-202ENST00000355192 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
MSRB3-202ENST00000355192 PELP1Q8IZL8 1130 aaKnown RBP21.45■■□□□ 1.02
MSRB3-202ENST00000355192 CENPBP07199 599 aaPredicted RBP21.42■■□□□ 1.02
MSRB3-202ENST00000355192 APLP2Q06481 763 aa21.41■■□□□ 1.02
MSRB3-202ENST00000355192 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
MSRB3-202ENST00000355192 RANGAP1P46060 587 aaPredicted RBP21.09■□□□□ 0.97
MSRB3-202ENST00000355192 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
MSRB3-202ENST00000355192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.87■□□□□ 0.93
MSRB3-202ENST00000355192 MYT1Q01538 1121 aa20.8■□□□□ 0.92
MSRB3-202ENST00000355192 DIEXFQ68CQ4 756 aaKnown RBP20.72■□□□□ 0.91
MSRB3-202ENST00000355192 ZCCHC6Q5VYS8 1495 aaKnown RBP20.7■□□□□ 0.9
MSRB3-202ENST00000355192 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
MSRB3-202ENST00000355192 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.89
MSRB3-202ENST00000355192 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
MSRB3-202ENST00000355192 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
MSRB3-202ENST00000355192 GTF3C3Q9Y5Q9 886 aa20.51■□□□□ 0.87
MSRB3-202ENST00000355192 NEFLP07196 543 aa20.5■□□□□ 0.87
MSRB3-202ENST00000355192 ERICH6Q7L0X2 663 aa20.46■□□□□ 0.87
MSRB3-202ENST00000355192 ITGAEP38570 1179 aa20.43■□□□□ 0.86
MSRB3-202ENST00000355192 ACIN1Q9UKV3 1341 aaKnown RBP20.41■□□□□ 0.86
MSRB3-202ENST00000355192 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
MSRB3-202ENST00000355192 ABCC9O60706 1549 aa20.26■□□□□ 0.83
MSRB3-202ENST00000355192 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
MSRB3-202ENST00000355192 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
MSRB3-202ENST00000355192 NEUROD1Q13562 356 aa20.14■□□□□ 0.81
MSRB3-202ENST00000355192 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
MSRB3-202ENST00000355192 SCRIBQ14160 1630 aa20.1■□□□□ 0.81
MSRB3-202ENST00000355192 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
MSRB3-202ENST00000355192 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
MSRB3-202ENST00000355192 BCANQ96GW7 911 aa19.96■□□□□ 0.79
MSRB3-202ENST00000355192 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
MSRB3-202ENST00000355192 POLR3GLQ9BT43 218 aa19.83■□□□□ 0.77
MSRB3-202ENST00000355192 CNGB1Q14028 1251 aaPredicted RBP19.81■□□□□ 0.76
MSRB3-202ENST00000355192 MIER1Q8N108 512 aa19.79■□□□□ 0.76
MSRB3-202ENST00000355192 ANP32CO43423 234 aa19.74■□□□□ 0.75
MSRB3-202ENST00000355192 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
MSRB3-202ENST00000355192 CLSPNQ9HAW4 1339 aa19.66■□□□□ 0.74
MSRB3-202ENST00000355192 TRIM52Q96A61 297 aa19.61■□□□□ 0.73
MSRB3-202ENST00000355192 RB1CC1Q8TDY2 1594 aa19.58■□□□□ 0.73
MSRB3-202ENST00000355192 FKBP8Q14318 412 aa19.57■□□□□ 0.72
MSRB3-202ENST00000355192 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
MSRB3-202ENST00000355192 CLIP1P30622 1438 aa19.57■□□□□ 0.72
MSRB3-202ENST00000355192 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
MSRB3-202ENST00000355192 DDX10Q13206 875 aaKnown RBP19.54■□□□□ 0.72
MSRB3-202ENST00000355192 TNIKQ9UKE5 1360 aa19.51■□□□□ 0.71
MSRB3-202ENST00000355192 EEA1Q15075 1411 aa19.51■□□□□ 0.71
MSRB3-202ENST00000355192 DAXXQ9UER7 740 aaPredicted RBP19.49■□□□□ 0.71
MSRB3-202ENST00000355192 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
MSRB3-202ENST00000355192 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
MSRB3-202ENST00000355192 RTL5Q5HYW3 569 aaPredicted RBP19.47■□□□□ 0.71
MSRB3-202ENST00000355192 ZNF326Q5BKZ1 582 aaKnown RBP19.37■□□□□ 0.69
MSRB3-202ENST00000355192 TONSLQ96HA7 1378 aa19.37■□□□□ 0.69
MSRB3-202ENST00000355192 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
MSRB3-202ENST00000355192 HNRNPUQ00839 825 aaKnown RBP eCLIP19.35■□□□□ 0.69
MSRB3-202ENST00000355192 SOGA1O94964 1423 aa19.33■□□□□ 0.69
MSRB3-202ENST00000355192 HIRIP3Q9BW71 556 aaPredicted RBP19.31■□□□□ 0.68
MSRB3-202ENST00000355192 NACADO15069 1562 aa19.31■□□□□ 0.68
MSRB3-202ENST00000355192 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
MSRB3-202ENST00000355192 MROH2BQ7Z745 1585 aa19.28■□□□□ 0.68
MSRB3-202ENST00000355192 BAZ1AQ9NRL2 1556 aaPredicted RBP19.25■□□□□ 0.67
MSRB3-202ENST00000355192 ARID3CA6NKF2 412 aa19.25■□□□□ 0.67
MSRB3-202ENST00000355192 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
MSRB3-202ENST00000355192 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
MSRB3-202ENST00000355192 FAM9BQ8IZU0 186 aa19.2■□□□□ 0.66
MSRB3-202ENST00000355192 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
MSRB3-202ENST00000355192 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
MSRB3-202ENST00000355192 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
MSRB3-202ENST00000355192 ANP32AP39687 249 aaKnown RBP19.14■□□□□ 0.66
MSRB3-202ENST00000355192 ANP32EQ9BTT0 268 aa19.12■□□□□ 0.65
MSRB3-202ENST00000355192 CHIC2Q9UKJ5 165 aa19.11■□□□□ 0.65
MSRB3-202ENST00000355192 VPS8Q8N3P4 1428 aa19.09■□□□□ 0.65
MSRB3-202ENST00000355192 SIN3AQ96ST3 1273 aa19.07■□□□□ 0.64
MSRB3-202ENST00000355192 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
MSRB3-202ENST00000355192 NPM2Q86SE8 214 aaKnown RBP19.05■□□□□ 0.64
MSRB3-202ENST00000355192 MTUS2Q5JR59 1369 aa19.05■□□□□ 0.64
MSRB3-202ENST00000355192 WIZO95785 1651 aa19.04■□□□□ 0.64
MSRB3-202ENST00000355192 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
MSRB3-202ENST00000355192 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
MSRB3-202ENST00000355192 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
MSRB3-202ENST00000355192 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.64
MSRB3-202ENST00000355192 KIF27Q86VH2 1401 aa19.01■□□□□ 0.63
MSRB3-202ENST00000355192 CCDC136Q96JN2 1154 aa18.99■□□□□ 0.63
MSRB3-202ENST00000355192 KANK4Q5T7N3 995 aaPredicted RBP18.98■□□□□ 0.63
MSRB3-202ENST00000355192 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.63
MSRB3-202ENST00000355192 FBLN2P98095 1184 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms