Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 RARRES2P9-201ENST00000565168 469 ntBASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 MTDHP5-201ENST00000598980 586 ntBASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR2J2Q9GZM3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 AL353705.2-201ENST00000428243 662 ntBASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 AL592309.1-201ENST00000443127 649 ntBASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 TIMM8BP1-201ENST00000452384 211 ntBASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 UXT-AS1-201ENST00000590504 1525 ntBASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J2Q9GZM3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 AL359258.3-201ENST00000622910 2331 ntBASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 FO393414.2-201ENST00000405153 598 ntBASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 AC026396.1-201ENST00000419388 421 ntBASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 KRT18P58-201ENST00000527480 1120 ntBASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 SLC25A39P2-201ENST00000537614 270 ntBASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 AC139749.1-202ENST00000617529 3139 ntBASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
POLR2J2Q9GZM3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms