RNA–Protein interactions for RNA: ENST00000326391.6

POLR2J4-203, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 1,422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-203ENST00000326391 NISCHQ9Y2I1 1504 aa40.1■■■■■ 4.01
POLR2J4-203ENST00000326391 CCDC180Q9P1Z9 1646 aa35.64■■■■□ 3.3
POLR2J4-203ENST00000326391 ABCC9O60706 1549 aa34.93■■■■□ 3.18
POLR2J4-203ENST00000326391 RB1CC1Q8TDY2 1594 aa33.56■■■□□ 2.96
POLR2J4-203ENST00000326391 NACADO15069 1562 aa33.52■■■□□ 2.96
POLR2J4-203ENST00000326391 DCAF8L2P0C7V8 631 aa33.47■■■□□ 2.95
POLR2J4-203ENST00000326391 ZCCHC6Q5VYS8 1495 aaKnown RBP33.4■■■□□ 2.94
POLR2J4-203ENST00000326391 MYO15BQ96JP2 1530 aa33.32■■■□□ 2.92
POLR2J4-203ENST00000326391 DCAF1Q9Y4B6 1507 aa33.17■■■□□ 2.9
POLR2J4-203ENST00000326391 UNC13AQ9UPW8 1703 aa32.83■■■□□ 2.85
POLR2J4-203ENST00000326391 PABPN1Q86U42 306 aaKnown RBP eCLIP32.64■■■□□ 2.82
POLR2J4-203ENST00000326391 BICRAQ9NZM4 1560 aa32.59■■■□□ 2.81
POLR2J4-203ENST00000326391 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
POLR2J4-203ENST00000326391 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
POLR2J4-203ENST00000326391 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.74
POLR2J4-203ENST00000326391 EIF4G1Q04637 1599 aaKnown RBP31.71■■■□□ 2.67
POLR2J4-203ENST00000326391 CC2D2AQ9P2K1 1620 aa31.59■■■□□ 2.65
POLR2J4-203ENST00000326391 CECR2Q9BXF3 1484 aa31.38■■■□□ 2.61
POLR2J4-203ENST00000326391 SMARCA4P51532 1647 aa31.11■■■□□ 2.57
POLR2J4-203ENST00000326391 BAZ1AQ9NRL2 1556 aaPredicted RBP31.06■■■□□ 2.56
POLR2J4-203ENST00000326391 ATAD2BQ9ULI0 1458 aa30.97■■■□□ 2.55
POLR2J4-203ENST00000326391 NCAPD3P42695 1498 aa30.94■■■□□ 2.54
POLR2J4-203ENST00000326391 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
POLR2J4-203ENST00000326391 SMARCA2P51531 1590 aa30.9■■■□□ 2.54
POLR2J4-203ENST00000326391 PEG3Q9GZU2 1588 aa30.82■■■□□ 2.52
POLR2J4-203ENST00000326391 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
POLR2J4-203ENST00000326391 BAZ1BQ9UIG0 1483 aaKnown RBP30.69■■■□□ 2.5
POLR2J4-203ENST00000326391 WIZO95785 1651 aa30.57■■■□□ 2.48
POLR2J4-203ENST00000326391 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
POLR2J4-203ENST00000326391 TOP2AP11388 1531 aaKnown RBP30.24■■■□□ 2.43
POLR2J4-203ENST00000326391 NESP48681 1621 aa30.23■■■□□ 2.43
POLR2J4-203ENST00000326391 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
POLR2J4-203ENST00000326391 ERCC6Q03468 1493 aa30.07■■■□□ 2.4
POLR2J4-203ENST00000326391 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
POLR2J4-203ENST00000326391 PDS5BQ9NTI5 1447 aa29.9■■■□□ 2.38
POLR2J4-203ENST00000326391 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
POLR2J4-203ENST00000326391 CFTRP13569 1480 aa29.86■■■□□ 2.37
POLR2J4-203ENST00000326391 KIF21AQ7Z4S6 1674 aa29.85■■■□□ 2.37
POLR2J4-203ENST00000326391 THOC2Q8NI27 1593 aaKnown RBP29.77■■■□□ 2.36
POLR2J4-203ENST00000326391 CUX2O14529 1486 aa29.77■■■□□ 2.36
POLR2J4-203ENST00000326391 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
POLR2J4-203ENST00000326391 DNAJC5Q9H3Z4 198 aa29.7■■■□□ 2.34
POLR2J4-203ENST00000326391 FANCD2Q9BXW9 1451 aa29.69■■■□□ 2.34
POLR2J4-203ENST00000326391 CEP164Q9UPV0 1460 aa29.65■■■□□ 2.34
POLR2J4-203ENST00000326391 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
POLR2J4-203ENST00000326391 PRDM2Q13029 1718 aa29.6■■■□□ 2.33
POLR2J4-203ENST00000326391 WDR62O43379 1518 aa29.53■■■□□ 2.32
POLR2J4-203ENST00000326391 URB2Q14146 1524 aaKnown RBP29.42■■■□□ 2.3
POLR2J4-203ENST00000326391 TOPBP1Q92547 1522 aa29.23■■■□□ 2.27
POLR2J4-203ENST00000326391 ABCC8Q09428 1581 aa29.18■■■□□ 2.26
POLR2J4-203ENST00000326391 DNMBPQ6XZF7 1577 aa29.18■■■□□ 2.26
POLR2J4-203ENST00000326391 IFT140Q96RY7 1462 aa29.03■■■□□ 2.24
POLR2J4-203ENST00000326391 CUX1P39880 1505 aa29.01■■■□□ 2.23
POLR2J4-203ENST00000326391 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
POLR2J4-203ENST00000326391 ZNF608Q9ULD9 1512 aaPredicted RBP28.93■■■□□ 2.22
POLR2J4-203ENST00000326391 TARBP1Q13395 1621 aaKnown RBP28.92■■■□□ 2.22
POLR2J4-203ENST00000326391 FGD5Q6ZNL6 1462 aa28.89■■■□□ 2.22
POLR2J4-203ENST00000326391 RAD54L2Q9Y4B4 1467 aa28.86■■■□□ 2.21
POLR2J4-203ENST00000326391 SOGA1O94964 1423 aa28.84■■■□□ 2.21
POLR2J4-203ENST00000326391 EIF4G3O43432 1585 aaKnown RBP28.8■■■□□ 2.2
POLR2J4-203ENST00000326391 WRNQ14191 1432 aaPredicted RBP eCLIP28.78■■■□□ 2.2
POLR2J4-203ENST00000326391 AQRO60306 1485 aaKnown RBP eCLIP28.76■■■□□ 2.192e-10■■■■■ 40.6
POLR2J4-203ENST00000326391 SYNJ1O43426 1573 aa28.74■■■□□ 2.19
POLR2J4-203ENST00000326391 TOP2BQ02880 1626 aa28.73■■■□□ 2.19
POLR2J4-203ENST00000326391 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
POLR2J4-203ENST00000326391 TDRD9Q8NDG6 1382 aaKnown RBP28.7■■■□□ 2.18
POLR2J4-203ENST00000326391 WDR97A6NE52 1622 aa28.66■■■□□ 2.18
POLR2J4-203ENST00000326391 ABCA10Q8WWZ4 1543 aa28.61■■■□□ 2.17
POLR2J4-203ENST00000326391 OSCARQ8IYS5 282 aa28.53■■■□□ 2.16
POLR2J4-203ENST00000326391 ABCA5Q8WWZ7 1642 aa28.51■■■□□ 2.15
POLR2J4-203ENST00000326391 GAPVD1Q14C86 1478 aa28.51■■■□□ 2.15
POLR2J4-203ENST00000326391 GRIN2BQ13224 1484 aa28.5■■■□□ 2.15
POLR2J4-203ENST00000326391 SNAPC4Q5SXM2 1469 aa28.48■■■□□ 2.15
POLR2J4-203ENST00000326391 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
POLR2J4-203ENST00000326391 CHD1O14646 1710 aa28.44■■■□□ 2.14
POLR2J4-203ENST00000326391 MAGI1Q96QZ7 1491 aaPredicted RBP28.43■■■□□ 2.14
POLR2J4-203ENST00000326391 FBLN2P98095 1184 aa28.37■■■□□ 2.13
POLR2J4-203ENST00000326391 TRIM41Q8WV44 630 aa28.33■■■□□ 2.13
POLR2J4-203ENST00000326391 SYNJ2O15056 1496 aa28.32■■■□□ 2.12
POLR2J4-203ENST00000326391 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
POLR2J4-203ENST00000326391 ERICH3Q5RHP9 1530 aa28.26■■■□□ 2.11
POLR2J4-203ENST00000326391 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
POLR2J4-203ENST00000326391 KIF27Q86VH2 1401 aa28.18■■■□□ 2.1
POLR2J4-203ENST00000326391 FHAD1B1AJZ9 1412 aa28.17■■■□□ 2.1
POLR2J4-203ENST00000326391 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
POLR2J4-203ENST00000326391 CLASP1Q7Z460 1538 aa28.15■■■□□ 2.1
POLR2J4-203ENST00000326391 RIMBP3CA6NJZ7 1639 aa28.1■■■□□ 2.09
POLR2J4-203ENST00000326391 RIMBP3BA6NNM3 1639 aa28.1■■■□□ 2.09
POLR2J4-203ENST00000326391 RIMBP3Q9UFD9 1639 aa28.1■■■□□ 2.09
POLR2J4-203ENST00000326391 ARHGEF11O15085 1522 aa28.1■■■□□ 2.09
POLR2J4-203ENST00000326391 IGF1RP08069 1367 aa28.09■■■□□ 2.09
POLR2J4-203ENST00000326391 NUP160Q12769 1436 aa28.04■■■□□ 2.08
POLR2J4-203ENST00000326391 CEP170Q5SW79 1584 aa28.02■■■□□ 2.08
POLR2J4-203ENST00000326391 CUL7Q14999 1698 aa27.99■■■□□ 2.07
POLR2J4-203ENST00000326391 RUSC2Q8N2Y8 1516 aa27.96■■■□□ 2.07
POLR2J4-203ENST00000326391 CARMIL1Q5VZK9 1371 aa27.9■■■□□ 2.06
POLR2J4-203ENST00000326391 ARAP1Q96P48 1450 aa27.87■■■□□ 2.05
POLR2J4-203ENST00000326391 SHROOM2Q13796 1616 aa27.83■■■□□ 2.05
POLR2J4-203ENST00000326391 CYB5RLQ6IPT4 315 aa27.83■■■□□ 2.05
POLR2J4-203ENST00000326391 ERCC6L2Q5T890 1561 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms