RNA–Protein interactions for RNA: ENST00000375498.6

HTR3A-203, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 1 (best) BASIC

Gene HTR3A, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-203ENST00000375498 NISCHQ9Y2I1 1504 aa33.29■■■□□ 2.92
HTR3A-203ENST00000375498 CCDC180Q9P1Z9 1646 aa28.53■■■□□ 2.16
HTR3A-203ENST00000375498 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
HTR3A-203ENST00000375498 SHROOM4Q9ULL8 1493 aa28.02■■■□□ 2.08
HTR3A-203ENST00000375498 DCAF8L2P0C7V8 631 aa27.52■■■□□ 2
HTR3A-203ENST00000375498 DCAF1Q9Y4B6 1507 aa27.35■■□□□ 1.97
HTR3A-203ENST00000375498 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
HTR3A-203ENST00000375498 MYO15BQ96JP2 1530 aa26.69■■□□□ 1.86
HTR3A-203ENST00000375498 SCRIBQ14160 1630 aa26.62■■□□□ 1.85
HTR3A-203ENST00000375498 ABCC9O60706 1549 aa26.6■■□□□ 1.85
HTR3A-203ENST00000375498 CHIC1Q5VXU3 224 aa26.43■■□□□ 1.82
HTR3A-203ENST00000375498 NACADO15069 1562 aa26.4■■□□□ 1.82
HTR3A-203ENST00000375498 RSF1Q96T23 1441 aaPredicted RBP26.18■■□□□ 1.78
HTR3A-203ENST00000375498 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
HTR3A-203ENST00000375498 CECR2Q9BXF3 1484 aa25.97■■□□□ 1.75
HTR3A-203ENST00000375498 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
HTR3A-203ENST00000375498 UNC13AQ9UPW8 1703 aa25.75■■□□□ 1.71
HTR3A-203ENST00000375498 WIZO95785 1651 aa25.73■■□□□ 1.71
HTR3A-203ENST00000375498 LOC105371045A0A1W2PR82 267 aa25.6■■□□□ 1.69
HTR3A-203ENST00000375498 BAZ1AQ9NRL2 1556 aaPredicted RBP25.58■■□□□ 1.69
HTR3A-203ENST00000375498 TRIM41Q8WV44 630 aa25.45■■□□□ 1.67
HTR3A-203ENST00000375498 SMARCA4P51532 1647 aa25.45■■□□□ 1.66
HTR3A-203ENST00000375498 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.65
HTR3A-203ENST00000375498 PABPN1Q86U42 306 aaKnown RBP eCLIP25.33■■□□□ 1.65
HTR3A-203ENST00000375498 TOP2AP11388 1531 aaKnown RBP25.31■■□□□ 1.64
HTR3A-203ENST00000375498 EIF4G1Q04637 1599 aaKnown RBP25.28■■□□□ 1.64
HTR3A-203ENST00000375498 FAM9AQ8IZU1 332 aaPredicted RBP25.21■■□□□ 1.63
HTR3A-203ENST00000375498 PCGF6Q9BYE7 350 aa25.2■■□□□ 1.62
HTR3A-203ENST00000375498 SMARCA2P51531 1590 aa25.17■■□□□ 1.62
HTR3A-203ENST00000375498 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
HTR3A-203ENST00000375498 ABCC8Q09428 1581 aa25■■□□□ 1.59
HTR3A-203ENST00000375498 PEG3Q9GZU2 1588 aa24.99■■□□□ 1.59
HTR3A-203ENST00000375498 HRCP23327 699 aa24.99■■□□□ 1.59
HTR3A-203ENST00000375498 EHMT2Q96KQ7 1210 aa24.98■■□□□ 1.59
HTR3A-203ENST00000375498 ATAD2BQ9ULI0 1458 aa24.84■■□□□ 1.57
HTR3A-203ENST00000375498 TRIM26Q12899 539 aaPredicted RBP24.82■■□□□ 1.56
HTR3A-203ENST00000375498 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
HTR3A-203ENST00000375498 SOGA1O94964 1423 aa24.67■■□□□ 1.54
HTR3A-203ENST00000375498 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
HTR3A-203ENST00000375498 RUSC2Q8N2Y8 1516 aa24.58■■□□□ 1.53
HTR3A-203ENST00000375498 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
HTR3A-203ENST00000375498 PPARGC1BQ86YN6 1023 aaKnown RBP24.53■■□□□ 1.52
HTR3A-203ENST00000375498 EEA1Q15075 1411 aa24.48■■□□□ 1.51
HTR3A-203ENST00000375498 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.5
HTR3A-203ENST00000375498 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
HTR3A-203ENST00000375498 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
HTR3A-203ENST00000375498 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
HTR3A-203ENST00000375498 TNIKQ9UKE5 1360 aa24.37■■□□□ 1.49
HTR3A-203ENST00000375498 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
HTR3A-203ENST00000375498 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
HTR3A-203ENST00000375498 TOP2BQ02880 1626 aa24.27■■□□□ 1.48
HTR3A-203ENST00000375498 KIF21BO75037 1637 aa24.22■■□□□ 1.47
HTR3A-203ENST00000375498 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
HTR3A-203ENST00000375498 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.46
HTR3A-203ENST00000375498 CFTRP13569 1480 aa24.13■■□□□ 1.45
HTR3A-203ENST00000375498 CUX1P39880 1505 aa24.1■■□□□ 1.45
HTR3A-203ENST00000375498 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
HTR3A-203ENST00000375498 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
HTR3A-203ENST00000375498 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.45
HTR3A-203ENST00000375498 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
HTR3A-203ENST00000375498 CC2D2AQ9P2K1 1620 aa24.01■■□□□ 1.43
HTR3A-203ENST00000375498 CLIP1P30622 1438 aa24■■□□□ 1.43
HTR3A-203ENST00000375498 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
HTR3A-203ENST00000375498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.9■■□□□ 1.42
HTR3A-203ENST00000375498 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
HTR3A-203ENST00000375498 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
HTR3A-203ENST00000375498 RANGAP1P46060 587 aaPredicted RBP23.87■■□□□ 1.41
HTR3A-203ENST00000375498 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
HTR3A-203ENST00000375498 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
HTR3A-203ENST00000375498 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
HTR3A-203ENST00000375498 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
HTR3A-203ENST00000375498 CUX2O14529 1486 aa23.7■■□□□ 1.38
HTR3A-203ENST00000375498 ARAP1Q96P48 1450 aa23.7■■□□□ 1.38
HTR3A-203ENST00000375498 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
HTR3A-203ENST00000375498 NESP48681 1621 aa23.64■■□□□ 1.37
HTR3A-203ENST00000375498 IGF1RP08069 1367 aa23.63■■□□□ 1.37
HTR3A-203ENST00000375498 APLP2Q06481 763 aa23.63■■□□□ 1.37
HTR3A-203ENST00000375498 DNMBPQ6XZF7 1577 aa23.55■■□□□ 1.36
HTR3A-203ENST00000375498 HNRNPUL2Q1KMD3 747 aaKnown RBP23.55■■□□□ 1.36
HTR3A-203ENST00000375498 ARHGAP35Q9NRY4 1499 aa23.54■■□□□ 1.36
HTR3A-203ENST00000375498 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
HTR3A-203ENST00000375498 TOPBP1Q92547 1522 aa23.51■■□□□ 1.35
HTR3A-203ENST00000375498 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
HTR3A-203ENST00000375498 KANK4Q5T7N3 995 aaPredicted RBP23.48■■□□□ 1.35
HTR3A-203ENST00000375498 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
HTR3A-203ENST00000375498 DNAJC5BQ9UF47 199 aa23.46■■□□□ 1.35
HTR3A-203ENST00000375498 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
HTR3A-203ENST00000375498 ABCA10Q8WWZ4 1543 aa23.43■■□□□ 1.34
HTR3A-203ENST00000375498 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
HTR3A-203ENST00000375498 WDR97A6NE52 1622 aa23.32■■□□□ 1.32
HTR3A-203ENST00000375498 KIF21AQ7Z4S6 1674 aa23.29■■□□□ 1.32
HTR3A-203ENST00000375498 CUL7Q14999 1698 aa23.27■■□□□ 1.32
HTR3A-203ENST00000375498 RRBP1Q9P2E9 1410 aaKnown RBP23.26■■□□□ 1.31
HTR3A-203ENST00000375498 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
HTR3A-203ENST00000375498 TIAM1Q13009 1591 aa23.24■■□□□ 1.31
HTR3A-203ENST00000375498 P3H3Q8IVL6 736 aa23.21■■□□□ 1.31
HTR3A-203ENST00000375498 CTTNBP2Q8WZ74 1663 aa23.21■■□□□ 1.31
HTR3A-203ENST00000375498 ABCA5Q8WWZ7 1642 aa23.2■■□□□ 1.31
HTR3A-203ENST00000375498 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
HTR3A-203ENST00000375498 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms