Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LINC00528-201ENST00000600723 2160 ntBASIC15.06■□□□□ 0
CLHC1Q8NHS4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.05■□□□□ 0
CLHC1Q8NHS4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.05■□□□□ 0
CLHC1Q8NHS4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
CLHC1Q8NHS4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CLHC1Q8NHS4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.05■□□□□ 0
CLHC1Q8NHS4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.05■□□□□ 0
CLHC1Q8NHS4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.05■□□□□ 0
CLHC1Q8NHS4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.05■□□□□ 0
CLHC1Q8NHS4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CLHC1Q8NHS4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CLHC1Q8NHS4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CLHC1Q8NHS4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 AL627223.1-201ENST00000416693 442 ntBASIC15.05■□□□□ -0
CLHC1Q8NHS4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 AL513210.1-201ENST00000629608 234 ntBASIC15.05■□□□□ -0
CLHC1Q8NHS4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.05■□□□□ -0
CLHC1Q8NHS4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CLHC1Q8NHS4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 AC126365.1-201ENST00000578585 1514 ntBASIC15.04■□□□□ -0
CLHC1Q8NHS4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 RBPMS2P1-201ENST00000437762 623 ntBASIC15.04■□□□□ -0
CLHC1Q8NHS4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 AC010327.4-202ENST00000591484 748 ntBASIC15.04■□□□□ -0
CLHC1Q8NHS4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.04■□□□□ -0
CLHC1Q8NHS4 AC018529.1-201ENST00000613063 361 ntBASIC15.04■□□□□ -0
CLHC1Q8NHS4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.04■□□□□ -0
CLHC1Q8NHS4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CLHC1Q8NHS4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms